| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02887 |
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| Symbol | |
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| ID | 6308305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 4917801 |
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| End bp | 4919600 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642642028 |
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| Product | glycosyl hydrolase, family 15 |
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| Protein accession | YP_001915860 |
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| Protein GI | 188578931 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTGC GTATCGAGGA CCATGCCATG CTGGGCAACT GCCACAGCGC GGCCCTGGTC
GATCACCGCG GCACCATCGA TTGGCTGTGT CTGCCACGCT TCGATTCCGA CGCCGTCTTC
GCCTCGTTGT TGGGCGCTGA CCAACATGGG CAATGGGCAT TGTCGCCGGC TGCCGACTTC
CGCACCGAGC GCGCCTACGA AGACGACAGT CTGGTGCTGT GCACGCGCAT GATCACCGAC
AGCGGCACGG TGGAACTGGT CGACTTCATG GTGGCCAGCG AAAACACCGA AGTCCACCAG
CACCTGGTGC GTCTCGTGCG CTGCGTACAG GGCAGCGTGC CGATGCACAT GCGCCTCACC
TTCCGCTTCA ACTACGGCCG CACGGTGCCA TGGGTCACAC GTATCGTCGA TGGCATCCGC
GCCATCGCCG GCCCCGATCA ACTGGCACTG CGTTCGCCGC AAACGCTGCG CGGCCAAGAC
ATGGGCACCG AAGCCGACTT CACCCTGCGC GAAGGCGGAA GCACCTGGTT TCTGCTCAGC
CACGGCGCCT CGCATCTGGA GACGCCGCCC CTGATCGATG CCGAACAGGC ATTGCAACGC
ACCACCGCGT TCTGGCATGG CTGGGCGCGC CGCTGCACCG ATGTCGGGCC GTGGACCGAG
CAGGTACGCC GCTCTTTGGT CGTTTTGAAG GGACTGAGTT ATCTGCCCAC CGGCGGCATT
GTCGCCGCGC CCACTGCCGC GTTGCCGGAG CATCTGGGCG GCACGCGTAA TTGGGATTAC
CGCTACTGCT GGCTGCGCGA TTCGGTGTTC ACCCTGATTG CGTTGCTGCA GGCCGGGTAT
CGCGATGAAG CCGCTGCGTT TCGCGATTGG GTCCACCGCA CCATTGCCGG TTCGCCGGAT
CAATTGCAGG CGTTGTACGG CATCGCCGGC GAACGCCGCT TGCAGGAATG GGAAGCGTCC
TGGTTGCCCG GTTATGAAGA TTCCGGCCCG GTACGCATCG GTAATGGCGC GGTGGATCAG
TTTCAGCTCG ATGTCTATGG GGAGTTGATC GGCGCCTTTC ATTACGCAAG CGAAAAAGGC
GTCGGCCCGC CGTCGGACGA CGATGGTTCG TCCGCATCGC TGCTGGAAAA CATCCTCGAT
ACACTGGAAA CGCTGTGGCG CGAACCCGAT GAAGGCATCT GGGAAATCCG CGACGAGCGC
CGCCACTTCG TCCATTCCAA GGTGATGGCC TGGCTGGCGT TCGACTGCGG CGCGCGTGAC
GGCATCACCA ATGCAGACGC TGAAAAACGC GCGCACTGGG GCCGCATTGC CGACCAAATT
CGAGCCGAAG TCCTGGAAAA AGGCGTACAT CCGGACGGCC ATTTCGTGCA GAGCTATGGC
TCGGATCGGC TGGATGCCTC GCTGCTGCTG ATCCCCATCG TGGGTTTTCT GCCGCCGGAC
GATCCGCGCA TCGCTGCGAC CGCCGACGCG ATCGCACGCG ATCTCACCAT CGATGGATTG
ATCGAGCGCT ATCGTGCCGA CGACAGCGCC GACGGCCTGC CGGCCGGCGA GGGCACCTTC
CTGGCCTGCA GTTTCTGGCT GGTGGAAAAC TATGCCTTGA TCGGCCGCAC CGACCAGGCG
CGTGCGCTGC TCGAACGTCT GCTCGGGCTC TGCAACGACG TTGGTCTGCT CGCCGAAGAA
TACGACCCGC GCAGCAAACG CATGCTCGGC AACTTCCCGC AAGGGTATTC CCACGTGGCC
CTGGTCAATG CGGCATTGCG CCTGCACGGA CGCATGGGCG AAAAGGAAAC GCATCCATGA
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| Protein sequence | MSVRIEDHAM LGNCHSAALV DHRGTIDWLC LPRFDSDAVF ASLLGADQHG QWALSPAADF
RTERAYEDDS LVLCTRMITD SGTVELVDFM VASENTEVHQ HLVRLVRCVQ GSVPMHMRLT
FRFNYGRTVP WVTRIVDGIR AIAGPDQLAL RSPQTLRGQD MGTEADFTLR EGGSTWFLLS
HGASHLETPP LIDAEQALQR TTAFWHGWAR RCTDVGPWTE QVRRSLVVLK GLSYLPTGGI
VAAPTAALPE HLGGTRNWDY RYCWLRDSVF TLIALLQAGY RDEAAAFRDW VHRTIAGSPD
QLQALYGIAG ERRLQEWEAS WLPGYEDSGP VRIGNGAVDQ FQLDVYGELI GAFHYASEKG
VGPPSDDDGS SASLLENILD TLETLWREPD EGIWEIRDER RHFVHSKVMA WLAFDCGARD
GITNADAEKR AHWGRIADQI RAEVLEKGVH PDGHFVQSYG SDRLDASLLL IPIVGFLPPD
DPRIAATADA IARDLTIDGL IERYRADDSA DGLPAGEGTF LACSFWLVEN YALIGRTDQA
RALLERLLGL CNDVGLLAEE YDPRSKRMLG NFPQGYSHVA LVNAALRLHG RMGEKETHP
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