Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02772 |
Symbol | ddl |
ID | 6308424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 5025293 |
End bp | 5026402 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642642143 |
Product | D-alanyl-alanine synthetase A |
Protein accession | YP_001915973 |
Protein GI | 188579044 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCAAGA TCCGGGTCGG CCTCATCTTC GGCGGCAAAT CGGCCGAGCA CGAGGTTTCG TTGCAATCGG CGGGCAACAT CCTGGATGCG CTGGACCCGC AACGCTTCGA GCCGGTGCTG ATTGGTATCG ACAAGCAAGG CCAATGGCAC GTCAACGACC CCGACAGCTT CCTGCTCCAT GCCGACGACC CGGCACGTAT TGCGCTGCAT CGCAGTGGTC GCGGGGTGGC ACTGCTGCCG GGCGCGCAAC AGCAGCAATT GCGGCCCATC CAGCCGGAGC AGGCGCTGGC GCTGGCGCAA ATCGATGTGG TGTTCCCCAT CGTGCACGGC ACCTTGGGCG AAGACGGCTC GCTGCAGGGG CTGCTGCGCA TGGCCAACCT GCCCTTCGTG GGCTCCGGCG TGCTGGGCTC GGCGGTGGCG ATGGACAAGG ACATGGCCAA GCGCGTGTTG CGCGATGCCA GGCTGGCGGT GGCACCGTTC GTCTGCTTCG ACCGCCACAC CGCCGCGCAC GCCGATGTGG ATACGTTGAT CGCGCAGCTG GGCTTGCCGT TGTTCGTCAA ACCGGCCAAC CAGGGCTCAT CGGTCGGCGT CAGCCAGGTG CGCACGGCCG ACGCATTCGC TGCTGCACTC GCCTTGGCGT TGGCCTATGA CCATAAGGTG CTGGTGGAAG CGGCCGTTGC CGGGCGCGAA ATCGAATGCG CCGTGCTGGG CAATGCCGTG CCACACGCAA GCGTCTGCGG CGAAGTGGTG GTGCACGACG CATTCTATTC GTACGCAACC AAATACATCA GCGAACACGG TGCCGAGATC GTGATTCCGG CCGACATCGA TGCGCAGACC CAGCAACGCA TCCAGCAGAT CGCAGTGCAG GCCTACCAGG CGCTGGGCTG CGCAGGCATG GCGCGCGTGG ACGTCTTTTT GTGCGCCGAT GGGCGCATCG TGATCAACGA GGTCAACACG CTGCCAGGCT TCACCCGCAT CAGCATGTAT CCGAAATTAT GGCAGGCAAG CGGGCTGGAC TATCGCGGTC TGATTACGCG GTTGATCGAG CTCGCACTGG AACGGCACAC AGACGACCAA CTGCTGCGCA GCGCGGTCGA GCTACACTGA
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Protein sequence | MRKIRVGLIF GGKSAEHEVS LQSAGNILDA LDPQRFEPVL IGIDKQGQWH VNDPDSFLLH ADDPARIALH RSGRGVALLP GAQQQQLRPI QPEQALALAQ IDVVFPIVHG TLGEDGSLQG LLRMANLPFV GSGVLGSAVA MDKDMAKRVL RDARLAVAPF VCFDRHTAAH ADVDTLIAQL GLPLFVKPAN QGSSVGVSQV RTADAFAAAL ALALAYDHKV LVEAAVAGRE IECAVLGNAV PHASVCGEVV VHDAFYSYAT KYISEHGAEI VIPADIDAQT QQRIQQIAVQ AYQALGCAGM ARVDVFLCAD GRIVINEVNT LPGFTRISMY PKLWQASGLD YRGLITRLIE LALERHTDDQ LLRSAVELH
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