Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02769 |
Symbol | ubiB |
ID | 6308427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 5027278 |
End bp | 5028951 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642642146 |
Product | putative ubiquinone biosynthesis protein UbiB |
Protein accession | YP_001915976 |
Protein GI | 188579047 |
COG category | [R] General function prediction only |
COG ID | [COG0661] Predicted unusual protein kinase |
TIGRFAM ID | [TIGR01982] 2-polyprenylphenol 6-hydroxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.368527 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGCGA TCCTGCGGGC CAGCCGCATC GGCCGGGTGA TCCTGCGCTA CCGGCTGGAC GCCTTGCTCG AAGGCACCCC GGCCGAGCGC TGGCTGCGCC TTGCAAAACC GTTCGTGCCG CGCGCCAGCG CCGAAATCGC CGTGCAATCG CGCGGTGCGC GGCTGCGCCT GGCGTTGCAG GAATTGGGGC CGATCTTCGT CAAGTTTGGG CAGATCCTGT CCACCCGGCG CGATCTGATT CCGGCCGACG TGGCCGAAGA ACTCACCTTG TTGCAGGACC GGGTCAAGCC GTTCGATGGC GAAGCCGCGC GCCTGATCGT GGAGCGGGCG CTTGGCCTGC CGGTGAGCGT GGCATTTGCC AGCTTCGACA CCGTGCCGCT GGCGTCGGCG TCGATTGCCC AGGTGCATGC GGCCACGTTG CCGCCTGATG CCAATGGCGT GCGCCGCGAA GTGGTGGTCA AGGTGCTGCG CCCGGAGATT GAGCGTCAGA TCGATGCCGA TATTGCGCTG CTGCACTCGC TGGCCACGCT GGTCGAACGC ACCCACCCGC GCGCCGACAA GATCCGGCCG CGCGAAGTAG TGGCCGAGAT CGAAGGCACC TTGTCGGCCG AACTCGACCT GCAGCGCGAA GGCGCCAACG CCAGCGTGTT GCGCCGGTTC TGGGAAGGCT CGGACGATCT GTACGTGCCG GAAGTGATCT GGTCGCACAC CGCCGAGCGC GCGCTCACGC TGGAGCGTGT GTACGGCATT CCGTCCGACG ATATCGCCAA GCTCGATGCG GCAGGCATCG ACCGCAAGGC GCTGGCGGCC AAGGGCGTGC GCGTGTTCTA CACCCAGGTG TTCCGCGACA ACTTCTTCCA TGCCGATGCG CACGCTGGCA ACATCTGGGT CGATTCGGAC CCGGAGCGCC GCCTCAATCC GCGCTTCATC GCGTTGGATT TCGGCATCAT GGGCCAGCTC TCGCAGGAAG ATCAGTACTA CCTGGCCGAG AACTTCATGG CGATCTTCCA CAAGGATTAT CGCCGCATGG CCGAGTTGCA CGTCGAGGCA GGCTGGATGC CGTCGAACGT GCGCATCGAC GAACTGGAAG CAGCCGCGCG CTCGGTGTGC GAGCCGTATT TCACCCGGCC CCTGTCGGAA ATTTCGCTGG CGCAGGTGCT GATCAAATTG TTCCGCGTGG CGCAGCGCTA TGAATTGACC CTGCAGCCGC AGCTGATCCT GCTGCAAAAA ACGCTGCTCA ATATCGAAGG CGTGGGCCGG CAACTCGACC CCAAGCTGGA TATCTGGGCA GTGGCGCGGC CGGTGCTCGA ACGCATCCTG CGCGAGCGTT ACAGCCCACG CCGCGTGCTG CGCGAACTGA GCAAGCGGTT GCCGGAAATC ATGACCCATG CGCCGGACAT GCCGCGGCTG GTGCACAGCT GGTTGAAGCA GCAGGTGGAA GGGCGCCATC AGATCGACAT CCGTTCCACC GAACTGCTCG CGCTGGACCT GAGCTTGCGC AAGCTGCAAA CGCGCGTGGT GACCGCCATC ACCGGCAGCG GGTTGCTGGT GGTCGCTGCT GTGCTTTACG GCCTGCATCC GGATGGCTGG TACCTGGGCA CGGTGCCGGT GTGGAGCTGG ATCAGCGGCG GTGCCGGTTC GGCAGCGCTG CTGGTTGCCT GGTTGCGGCG TTAG
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Protein sequence | MKAILRASRI GRVILRYRLD ALLEGTPAER WLRLAKPFVP RASAEIAVQS RGARLRLALQ ELGPIFVKFG QILSTRRDLI PADVAEELTL LQDRVKPFDG EAARLIVERA LGLPVSVAFA SFDTVPLASA SIAQVHAATL PPDANGVRRE VVVKVLRPEI ERQIDADIAL LHSLATLVER THPRADKIRP REVVAEIEGT LSAELDLQRE GANASVLRRF WEGSDDLYVP EVIWSHTAER ALTLERVYGI PSDDIAKLDA AGIDRKALAA KGVRVFYTQV FRDNFFHADA HAGNIWVDSD PERRLNPRFI ALDFGIMGQL SQEDQYYLAE NFMAIFHKDY RRMAELHVEA GWMPSNVRID ELEAAARSVC EPYFTRPLSE ISLAQVLIKL FRVAQRYELT LQPQLILLQK TLLNIEGVGR QLDPKLDIWA VARPVLERIL RERYSPRRVL RELSKRLPEI MTHAPDMPRL VHSWLKQQVE GRHQIDIRST ELLALDLSLR KLQTRVVTAI TGSGLLVVAA VLYGLHPDGW YLGTVPVWSW ISGGAGSAAL LVAWLRR
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