| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02752 |
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| Symbol | |
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| ID | 6308445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 5045907 |
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| End bp | 5049359 |
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| Gene Length | 3453 bp |
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| Protein Length | 1150 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642642164 |
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| Product | two-component system sensor protein |
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| Protein accession | YP_001915994 |
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| Protein GI | 188579065 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0591] Na+/proline symporter
[COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGGTCT CGAGCTGGAT CCTGCTGCTG GTTTCCATCG GCTACGCAGC CCTGCTGTTC
GGGGTGGCGT GGTGGGGCGA CCGCCGTCCG CTGTACCCGG AGCGGCCGTG GCTGCGGCCG
GCGGTCTATA GCCTGGCATT GGCGGTGTAC TGCTCGTCGT GGACCTTCTA CGGGGCGGTG
GGCTCGGCGG TGCGCAACGG CATCGGCTAC CTGCCGATCT ATCTGGGCCC GCTGCTGTTG
CTGCTGTTCG GCTGGCGCAT CATCGAGCGC CTGGCGCTGA TCGCCCGCGC CGAAAACACC
GTGTCCATCG CCGATGTTAT CTCCTCGCGC TATGGCCGTT CGCGCCGGCT GGCGGCGTTG
GTGGCGGTGA TCGCGCTGGT CGGCATCATT CCGTACCTGG CGCTGCAGTA CAAGGCGGTG
GCGATGAGCC TGGAGGTATT GACCGGGCAT AGCAGCGCCG GGCGCGGCAT CTTCGCCGAC
CCGGCGTTGT ACGTGGCATT GCTGATGGCC TTGTTCGCCA CCCTGTTCGG TACCCGCCAG
GTGGATGCCA CCGAGCACCA CCGCGGCATG ATGCTGGCGA TCGCGCTGGA GTCGGTGATC
AAACTGGTCG CCATCGTGGC GGTGGGGTTG TTCGCGTGGC TGTGGTCGAG CGACCACCAG
CCGCATATCG CCGATTCTGC GCGCACGCTG TTCGAGCACA CGCCTTCGGT GGGCTTCATC
TCGCAGACGC TGCTGAGTTT TCTGGCGGTG ATCTGCCTGC CGCGTCAGTT CCATGTGGCG
GTGGTCGAAT GCAGCGACGT GGGCGATATA CGCCGCGCGC GGTGGTTGTT CGGCGCCTAT
CTGGTGATCA TCTCGGCGAT GGTGGTGCCG ATCGCCTCGG CCGGCATCGC GCTGTTCGGC
AAGGGCAGTG CGGTGGTGGA CGATGCGGTG GTGCTCGCCC TGCCGCTCAG CCAGGGCAAT
ACCGTGCTGG CGCTGGTGGC CTACGTGGGC GGGTTCTCAG CCGCCACCGG CATGGTGATC
GTGGCCAGTA TCGCGTTAGC CACCATGGTC AGCAACGACC TGGTGATGCC GGTGCTGCTG
CGTCGCCGTG GCAGCGCCGA TGCACGCGCG GCGGTGGCCT CGCGCGTGTT GTGGATTCGT
CGCGTTGCCA TCTTGCTGCT GGCGCTCACT GCCTATGGCT ACCACCGCAG TGTCGCCAAC
GACACCACCT TGGCTGCTTT TGGGTTGATG GCATTTGCCG CAGTGGCGCA GTTCGCGCCG
GGCGTGATCG GTGGGTTGTA TTGGCGTGGG GCCAGCCGCA AGGGCGTGGA GACCGGCATG
GTGCTCGGCT TCATGACCTG GATCTACACG CTGCTGCTGC CGGCCGCCAC GCGCGCCGGT
TGGCTGCAGC CGGAATGGCT GGTGGACGGG CCGTTCGGCA TCGCTTGGCT TCAGCCGCAG
CAGCTGTTCG GGATGCGCGG CTGGGATCCG CTCGCGCACG GCACGTTCTG GTCGTTGTTG
ATCAACGTCG GCGCGATGAT GCTGGTGTCC GCACGCTGGC GTCCCGGCGT GGACGAGCGG
CTGCGTGCAG CGCCGTTTCT GGACCCGTAC GCGCAGCGCC CGGCGGTGGC CGGCGACTGG
CCGGGGCATG TGCGCGTGGC CGATCTGCAG GCGTTGGCCG AGCGCGTGGT GGGTGAGCGG
CATGCGCATC GCGCCTTCGT CGATCAAGCG GCGCTGCTGG AGCGCGAACT GCAGCCCAGC
GTGGTCGCCG ACCGCGCCTG GGTGCAGTTC ACCGAGCGCT TGCTGGCCGC TTCGATCGGT
GCGGCCTCTG CACGTTTGGT GCTGACCAGC CTGTTGCGCG GTTCGGGCAT GGAACTGGGC
GAAGTGGTGG CGGTGCTGGA TGAAGCCGGC CAGGAGTTGC GCTTCAATCG CGAAATTCTG
TCCACCACGC TGGAAAACAT CAGCGCGGCG GTCAGCGTGG TCGACCCGGA CATGCGGTTG
ACTGCGTGGA ATCGGCGTTA CCAGCAGCTG TTCGGGTATC CCGATGGCAT GTTGTATGTG
GGCCGCCCGG TGGCCGATCT GATCCGTTAC AACGCCGAGC GAGGCGAGCT GGGCGAGGGC
GATATCGAAG ACCAGATCGA CCGCCGTATC CGGCATATGC GCGCCGGCTC GCCGCATGTG
TTCGAGCGCA CCCGCAGCGA CGGCAAGGTG ATCGAAATGC GCGGCCAGGC GCTGCCGGGG
GGCGGGTACG TCACCAGCTA TAACGACATC ACCGACTACA AGCGCGCCGA ACGCGCCTTG
CTGGATGCCA ACGAAAATCT CGAACAACGC GTGGCCGATC GCTCGCGCGA AGCCGAGCTG
GCGCAGCAAT CCAAGACCCG CTTTCTGGCG GCCATCAGCC ATGACGTGTT GCAGCCGCTC
AATGCCGCGC GTCTATTCGC CTCGGCCTTG CGCGAGAGCC ACCAGAACAA CGAAGAACAG
CGCCATCTGG CCGAACGTGT GGATGCCTCG TTGCGTGCGG CCGAAGAACT GCTCGACGGC
TTGCTCGATG TCTCGCGCCT GGATGCCGGC GGATTACGTC CCACAGTCGA AGGTTTCGAC
GCCAGCGCAC TGATGCACGA ACTGGCCGCG CAATATGCGC CGGTGGCGGC CAGCCGCGGT
CTTCGTCTGC AGGTGCATAG CCGCCCGATC TGGGTGCGCA GCGACCGCCG TCTGCTGCGC
CGGGTGATGC AGAACTTCCT GGCCAATGCG CTGCGCTACA CGCGCCAGGG CCGCATCGTG
CTGGGCATGC GCGGGCGTGG GCAGCAGGTG GAGCTGCAGG TGTGGGACAC CGGCCCGGGC
ATTCCCGAGC ACCATATGCG GCAGATCTTC GAAGAATTCC GCCGCTATCA GCAGCCCTTC
GATTGGGGTG AGCAGGGCCT GGGATTGGGC TTGTCGATTT GCCAACGCAT CTCGCGCCTG
CTCGATCACG ACTTGAGCGC ACGCAGCCAG GTCGGCCGCG GCAGCATGTT CTCGATTCTG
CTGCCGCGTG TGGCGCCGGT GCCGGTGACG CTGCTGTTGC CGGCGACGGT CGCGCGTGCA
TCGCCCAGTG GCGATTCGCT GGCCGGCTTG CGTGTGCTGT GCGTGGACAA CGACCGTGAA
ATTCTCGACG GCATGCGCGC ACTGCTCGGC CGCTGGCAGG TGGAAGTGAT CACCGCCAGC
ACGGTGGATC AGGCGCTGGA ACGTGCCCGC GAACAGCCGG ACCTGATGCT GGTGGATTAC
CACCTGCACG ACCGCATGGA TGGATTGGAC ACGCTCGATG CCGTGCAATC CGCCGCACCC
GCACCGATCG CCGGCGCCTT GCTCACCGCC GACGGCCGCG ACGAACTCAA GCAGCTCGCG
CGCGAACGTG GTTATCGCTT GCTGACCAAA CCGGTGAAAC CGGCATCGCT ACGTGCGTTT
TTGAGTGCGC ATCACGATGC GAAGAAACGC TGA
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| Protein sequence | MLVSSWILLL VSIGYAALLF GVAWWGDRRP LYPERPWLRP AVYSLALAVY CSSWTFYGAV
GSAVRNGIGY LPIYLGPLLL LLFGWRIIER LALIARAENT VSIADVISSR YGRSRRLAAL
VAVIALVGII PYLALQYKAV AMSLEVLTGH SSAGRGIFAD PALYVALLMA LFATLFGTRQ
VDATEHHRGM MLAIALESVI KLVAIVAVGL FAWLWSSDHQ PHIADSARTL FEHTPSVGFI
SQTLLSFLAV ICLPRQFHVA VVECSDVGDI RRARWLFGAY LVIISAMVVP IASAGIALFG
KGSAVVDDAV VLALPLSQGN TVLALVAYVG GFSAATGMVI VASIALATMV SNDLVMPVLL
RRRGSADARA AVASRVLWIR RVAILLLALT AYGYHRSVAN DTTLAAFGLM AFAAVAQFAP
GVIGGLYWRG ASRKGVETGM VLGFMTWIYT LLLPAATRAG WLQPEWLVDG PFGIAWLQPQ
QLFGMRGWDP LAHGTFWSLL INVGAMMLVS ARWRPGVDER LRAAPFLDPY AQRPAVAGDW
PGHVRVADLQ ALAERVVGER HAHRAFVDQA ALLERELQPS VVADRAWVQF TERLLAASIG
AASARLVLTS LLRGSGMELG EVVAVLDEAG QELRFNREIL STTLENISAA VSVVDPDMRL
TAWNRRYQQL FGYPDGMLYV GRPVADLIRY NAERGELGEG DIEDQIDRRI RHMRAGSPHV
FERTRSDGKV IEMRGQALPG GGYVTSYNDI TDYKRAERAL LDANENLEQR VADRSREAEL
AQQSKTRFLA AISHDVLQPL NAARLFASAL RESHQNNEEQ RHLAERVDAS LRAAEELLDG
LLDVSRLDAG GLRPTVEGFD ASALMHELAA QYAPVAASRG LRLQVHSRPI WVRSDRRLLR
RVMQNFLANA LRYTRQGRIV LGMRGRGQQV ELQVWDTGPG IPEHHMRQIF EEFRRYQQPF
DWGEQGLGLG LSICQRISRL LDHDLSARSQ VGRGSMFSIL LPRVAPVPVT LLLPATVARA
SPSGDSLAGL RVLCVDNDRE ILDGMRALLG RWQVEVITAS TVDQALERAR EQPDLMLVDY
HLHDRMDGLD TLDAVQSAAP APIAGALLTA DGRDELKQLA RERGYRLLTK PVKPASLRAF
LSAHHDAKKR
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