| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02749 |
|---|
| Symbol | |
|---|
| ID | 6308448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 5052850 |
|---|
| End bp | 5055255 |
|---|
| Gene Length | 2406 bp |
|---|
| Protein Length | 801 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642642167 |
|---|
| Product | NdvB protein |
|---|
| Protein accession | YP_001915997 |
|---|
| Protein GI | 188579068 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3459] Cellobiose phosphorylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGTGT CTGCAACGCC TCTTGCTGGT TCCGACGATC TGTCCACCTT GCTGGCACCC
AGTGCCGACG GTGCGCGCTA CGCGCTCTAT AGCCCCACCG CCATGCCCAA TGCCGGCGGC
TTTTTGTGGA ACCGCCGCAT GATGCTGCAG CTGACCTGCC GCGGTTATGC CACCGGCCAG
TTCATGCAGC CGGAGCCATC GAAATACGCG CACGCGCCGA TGCTAGAAGC ACGCAATTTC
ATGATGCCGG AGCAGCCGTA CTATGCGCAT CATCCCGGGC GCTTTTTCTA TCTCAAGGAC
GAAGACACCG GCGCGTTGTA TTCGGTGCCG CATGAACCGG TGCGCGCGCA GCCGCAAGCG
TTTGAATTCT CTGCGGGCAA GCACGATGTG CGCTGGCGCG TGCGTCACGA CGACATCGTG
GTGGAGTTGT GCGTGTCTCT GCCCACCGAC GATGCGGTGG AGCTGTGGGA ATGCCGTGTG
CACAACGTGT CCGCGCGCGC GCGCAGGCTG AGCCTGTATG CCTATTTTCC GGTCGGCTAC
ATGTCGTGGA TGCATCAATC CGGCGGTTAC GATCCGGCCT TGGGCGGGAT CGTCTGCCGC
AGCGTGGCGC CGTATCAAAA GGTGGACGAT TACTTCCGCC AGCGCGATTT CAAGGACTGC
ACCTTCCTGC TGCACGAGCA GACGCCGGTG GCCTGGGACG CGCAGCAGAT GGCGTTCGAA
GGCGAGGGTG GTTTGCACGC GCCATCGGCT GTGCAGGCCG AGCAGCTGGG CAACCATGCT
GCGCATTACG AAACGCCAGC CGCCGCATTG CAATACCGGC TGACACTGGA CGCCGATGCC
GCCAGCGTCC ACCGCTTCGC ATTCGGGCCG GCCAAGGACG ACGCCGACAT CGCCGCGCTA
CGTGCGCGCT ACCTGTCCGA AGCCGGCTTT GCCCAAGCCG CGCGTGAGTA TGCGCACTAT
CTGCAGGCCG GCCAGGGGTG CGTGCAGATC GCAACACCCG ATGCGGCACT GGACAATCTG
GTCAACCACT GGTTGCCGCG TCAGGTGTTC TATCACGGCG ACGTCAATCG CCTGACCACC
GATCCGCAGA CGCGCAACTA TCTGCAGGAC CATATGGGCA TGGCCTATCT GCAGCCAGCC
ACCGCACGCG CGGCGTTGCT GCATGCCTTG TCGCAGCAGG AACCCAGCGG CGCAATGCCG
GACGGCATTC TGTTGGTGGA AGGCGCCGAG CTGAAATACA TCAACCAGGT GCCGCATACC
GACCACTGCG TGTGGCTGCC GATCTTCCTG AGCGCGTATC TGGCCGAAAC CGGCGATGCC
AGCATCCTGG ACGCGATCGT GGAAACCCAC GACGGGCAGC GCCTGAGTGT GGCTGATCGG
TTGGATGCGG CGATGCAGTG GCTGCTGGAT GCGCGCGATG CGCGTGGTCT GAGTTTTATC
GCGCAGGGCG ATTGGTGCGA CCCCATGAAC ATGGTCGGCT GGCGCGGCAA GGGGGTGTCC
GGCTGGCTCA CCGTCGCCAC CGCGTATGCA TTGCGCTTGT GGTCGGAGAT CTGCAGCGCG
CAGGGCCGCA GCGCGCAGGG GCAGACATTC GGTGAGGCAG TTGCCGCCAT CAACGCCGAT
GCCAATCGTG AGTTGTGGGA TGGCAACTGG TACGCACGTG GCATCACCGA CGACGGCGTG
CGTTTCGGCA TCGCGGAGGA TGTGGAGGGG CGCATCTATC TCAATCCGCA GAGTTTCGCG
CTGCTGGCCG GTACTGCCGA TGCGGAGCAA CGTGCGGCGC TGCTGGAGGC GGTGCGCGAG
CAGCTGCACA CGCCGTATGG CCCGGTGATG CTGGCGCCGG CGTACACGCA TATGCGCGAC
GACGTCGGCC GGCTGACGCA GAAGTGGCCG GGCGCAGCGG AAAACGGTGC GGTGTACAAC
CACGCGGCGG CATTCTATTT GTACAGCCTG TACCAGATCG GCGAAGCCGA CCGCGCCTGG
GAGATCCTGC GCGCCCTGCT GCCAGGGCCG ACACGCGAGG ATGTACTGCA ACGCGGGCAC
CTGCCGGTGT CGTTGCCCAA CTACTACCGC GGCGCATGGC ATCAGTACCC GCGCACGGCC
GGGCGTTCGA GTCAGTTGTT CAACACCGGC ACGGTGGCGT GGGTGTATCG CTGCGTGCTG
GAAGGGTTAT TTGGCCTGGT CGGCGAGGGC GATGCGCTGG CGATTCGTCC GCAGCTGCCA
TCGCACTGGC CGCACGCGCG TGCGACACGT CAGTTCCGTG GTGCGGACTT CGAGGTCACG
CTGATGCGCG AGGCGGGCCG CACTGCGATG CAGGTGCTGG TGGATGGCGA GGTCTGTCCG
GATCGGCGCA TCGGCAACAT CGTGGGTGGG CAGGTGTATC GGGTCGAGGT ACGGCTGCCG
GGATGA
|
|---|
| Protein sequence | MTVSATPLAG SDDLSTLLAP SADGARYALY SPTAMPNAGG FLWNRRMMLQ LTCRGYATGQ
FMQPEPSKYA HAPMLEARNF MMPEQPYYAH HPGRFFYLKD EDTGALYSVP HEPVRAQPQA
FEFSAGKHDV RWRVRHDDIV VELCVSLPTD DAVELWECRV HNVSARARRL SLYAYFPVGY
MSWMHQSGGY DPALGGIVCR SVAPYQKVDD YFRQRDFKDC TFLLHEQTPV AWDAQQMAFE
GEGGLHAPSA VQAEQLGNHA AHYETPAAAL QYRLTLDADA ASVHRFAFGP AKDDADIAAL
RARYLSEAGF AQAAREYAHY LQAGQGCVQI ATPDAALDNL VNHWLPRQVF YHGDVNRLTT
DPQTRNYLQD HMGMAYLQPA TARAALLHAL SQQEPSGAMP DGILLVEGAE LKYINQVPHT
DHCVWLPIFL SAYLAETGDA SILDAIVETH DGQRLSVADR LDAAMQWLLD ARDARGLSFI
AQGDWCDPMN MVGWRGKGVS GWLTVATAYA LRLWSEICSA QGRSAQGQTF GEAVAAINAD
ANRELWDGNW YARGITDDGV RFGIAEDVEG RIYLNPQSFA LLAGTADAEQ RAALLEAVRE
QLHTPYGPVM LAPAYTHMRD DVGRLTQKWP GAAENGAVYN HAAAFYLYSL YQIGEADRAW
EILRALLPGP TREDVLQRGH LPVSLPNYYR GAWHQYPRTA GRSSQLFNTG TVAWVYRCVL
EGLFGLVGEG DALAIRPQLP SHWPHARATR QFRGADFEVT LMREAGRTAM QVLVDGEVCP
DRRIGNIVGG QVYRVEVRLP G
|
|---|
| |