| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02665 |
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| Symbol | xerD |
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| ID | 6307967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 4579165 |
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| End bp | 4580175 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642641695 |
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| Product | site-specific tyrosine recombinase XerD |
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| Protein accession | YP_001915532 |
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| Protein GI | 188578603 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCTCGCA ACGCGCGCGC CACGTTCTAT GCTGTTGCGA TGTCTGCCAG CAGTCCTGCC
GAACGCCGCC AACTCGCCCA GCAGCTACCG CCGCTGCAGG CGGCCGATGC CGGTGTGATC
GAGCGTTTCC TCGACCGGTT TTGGGCCGAG CAAGGCGTGG CGCGGCAGAC GCTGGAGAGC
TACCGGCGCG ATCTGGAAGG GTTGGCGCGC TGGCGCGCCG GCGCCGGCGG CGGTTTGCTC
GGCATCGACC GCGTGGCATT GTTCGACTAT CTGCGGTGGC GTGCCCAGGC CAATTACTCC
CCGCGCAGCA CGGCGCGGCT GCTGTCGACC TTGCGTGCGT TCTACGGCTG GTGCCTGCGC
GATGGCGTGC GCAGCGACGA CCCGACAGCG CTGATCGACC CGCCACAGCT GCCGCGCTCG
CTGCCCAAAG CGTTGACTGA AAGTCAGATC GAGGCGCTGC TGGCCGCCCC CGAGGTGGAT
ACTCCTGCGG GCCTGCGCGA CCGCGCCATG CTGGAGCTGA TGTACGCCGC GGGCCTGCGT
GTGAGCGAGC TGGTCAACCT GCCGGCAGTC GGGGTGAATC TGCGCCAGGG CGTGTTGCGG
GTCACCGGCA AGGGCAGCAA GGACCGGCTG GTGCCGCTGG GCGAGGAATC CCAGCATTGG
TTGGAACGTT ACCTGCGCGA GGCGCGCCCG CTGCTGGCCG CGAACAAGCC GGTGGCGGCG
GTGGATGGCC AGGTGCCGTT ATTCATCGAC GCCGCCCGCC AAGCGCTCAG TCGTCAGCAC
TTCTGGGCGT TGGTCAAACG CTACGCAGCG GTGGCCGGCA TCGACCCGGC GATGGTCAGC
CCACATGGGC TGCGCCACAG CTTTGCCACC CATTTGCTCA ACCACGGCGC CGACCTGCGC
GCGCTGCAGA TGCTGTTGGG CCACAGCTCG TTGTCGACCA CCCAGATCTA TACGCTGGTG
GCGCGCCAGC ATCTGCAGAA GCTGCACGCC AGCCATCATC CGCGTGGTTA G
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| Protein sequence | MSRNARATFY AVAMSASSPA ERRQLAQQLP PLQAADAGVI ERFLDRFWAE QGVARQTLES
YRRDLEGLAR WRAGAGGGLL GIDRVALFDY LRWRAQANYS PRSTARLLST LRAFYGWCLR
DGVRSDDPTA LIDPPQLPRS LPKALTESQI EALLAAPEVD TPAGLRDRAM LELMYAAGLR
VSELVNLPAV GVNLRQGVLR VTGKGSKDRL VPLGEESQHW LERYLREARP LLAANKPVAA
VDGQVPLFID AARQALSRQH FWALVKRYAA VAGIDPAMVS PHGLRHSFAT HLLNHGADLR
ALQMLLGHSS LSTTQIYTLV ARQHLQKLHA SHHPRG
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