| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02513 |
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| Symbol | tdh |
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| ID | 6307763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 4368554 |
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| End bp | 4369588 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642641498 |
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| Product | L-threonine 3-dehydrogenase |
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| Protein accession | YP_001915336 |
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| Protein GI | 188578407 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase
[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCAGA CGATGAAGGC GCTGGTCAAG CGCGAAACGA ACAAGGGCAT CTGGCTGGAA
CAGGTGCCAG TGCCGACGCC CGGCCCCAAC GAGGTGCTGA TCAAGCTGGA AAAGACCGCC
ATTTGCGGCA CCGATCTGCA CATCTACCTG TGGGACGAGT GGAGCCAGCG CACGATCAAG
CCGGGCCTGA CCATCGGCCA TGAATTCGTC GGTCGCGTGG CCGAGCTCGG TTCGGCAGTG
ACCGGCTATC AGGTCGGTCA ACGGGTGTCG GCCGAAGGCC ACATCGTGTG CGGCCATTGC
CGCAACTGCC GTGGCGGCCG CCCGCACCTG TGCCCCAACA CCATGGGCAT CGGCGTCAAC
GTCAATGGTG CCTTCGCCGA ATACATGGTG ATGCCGGCCA GCAACCTGTG GCCGATCCCG
GACCAGATTC CGTCCGAGTT GGCGGCATTC TTCGACCCCT ACGGCAATGC CGCGCATTGC
GCGCTGGAAT TCGACGTCAT CGGCGAGGAC GTACTGATCA CCGGCGCCGG CCCGATCGGC
ATCATTGCGG CCGGCATCTG CAAGCATATC GGTGCGCGCA ATGTGGTGGT CACCGATGTC
AATGATTTCC GTCTCAAGCT GGCCGCCGAT ATGGGTGCCA CGCGCGTGGT CAACGTGTCA
AAGACCTCGC TCAAGGACGT CATGGCCGAC CTGCACATGG AAGGCTTCGA CGTGGGCCTG
GAAATGAGCG GCAACCCGCG CGCGTTCAAC GACATGCTCG ATTGCATGTA CCACGGCGGC
AAGATCGCCA TGCTCGGCAT CATGCCGCGC GGCGCCGGTT GCGACTGGGA CAAGATCATC
TTCAAGGGCC TCACCGTGCA GGGCATCTAC GGCCGCAAGA TGTACGAGAC CTGGTACAAG
ATGACGCAGC TGGTGCTGTC GGGTTTTCCG CTGCACAAGG TGCTGACCCA TCAGCTGCCG
ATCGACGATT TCCAGAAGGG CTTCGACCTG ATGGAAGCAG GCAAGGCCGG CAAGGTCGTG
CTGAGCTGGA ATTGA
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| Protein sequence | MAQTMKALVK RETNKGIWLE QVPVPTPGPN EVLIKLEKTA ICGTDLHIYL WDEWSQRTIK
PGLTIGHEFV GRVAELGSAV TGYQVGQRVS AEGHIVCGHC RNCRGGRPHL CPNTMGIGVN
VNGAFAEYMV MPASNLWPIP DQIPSELAAF FDPYGNAAHC ALEFDVIGED VLITGAGPIG
IIAAGICKHI GARNVVVTDV NDFRLKLAAD MGATRVVNVS KTSLKDVMAD LHMEGFDVGL
EMSGNPRAFN DMLDCMYHGG KIAMLGIMPR GAGCDWDKII FKGLTVQGIY GRKMYETWYK
MTQLVLSGFP LHKVLTHQLP IDDFQKGFDL MEAGKAGKVV LSWN
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