Gene PXO_02371 details

Gene Information

• Locus tag: PXO_02371
• Symbol: rdgB
• ID: 6307608
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 4219672
• End bp: 4220271
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 642641346
• Product: putative deoxyribonucleotide triphosphate pyrophosphatase
• Protein accession: YP_001915194
• Protein GI: 188578265
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0127] Xanthosine triphosphate pyrophosphatase
• TIGRFAM ID: [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACACC TGGTCCTGGC CAGCGGCAAC GCCGGCAAAC TGGAAGAACT GCGCGCCATG 
CTCGCCGGCT TGCCGTTGCG CATCGTCGCG CAAGGCGAAC TGGGCGTGGA CGATGTTCCG 
GAAACCGGCC TGACGTTCGT CGAAAACGCC CTGATCAAGG CGCGCCATGC CAGCGCAGTG 
ACGGGGTTGC CGGCACTTGC CGACGACTCC GGGTTGATTG TGGACGCATT GGATGGCGCA 
CCCGGCTTGT ACAGCGCGCG CTACGCCGGC AGCCCCACCA ACGCGCTGGC CAATAACGCA 
AAGTTGCTCG ATGCGATGCG CGGCGTTCCG GCCGAGCGCC GCAGCGCACG GTTTTATGCG 
GTGATCGTGT TGCTGCGGCA TCCGGAAGAT CCGCAACCGC TGATCGCCGA AGGCAGCTGG 
GAAGGCACGA TCACCACCGA ACCGCGCGGC GATGGCGGCT TCGGCTACAA CCCGGTGTTT 
CTGGATCCGG TGTACGGCCT GACCGCTGCG GAAATGGACA GCGCATTGAA GAACCGTCTG 
AGCCATCGTG CCGTGGCCCT GGCCACGCTG CAGCACAAGC TGCACGCGTT GTCGCTGTGA 

 

Protein sequence

MKHLVLASGN AGKLEELRAM LAGLPLRIVA QGELGVDDVP ETGLTFVENA LIKARHASAV 
TGLPALADDS GLIVDALDGA PGLYSARYAG SPTNALANNA KLLDAMRGVP AERRSARFYA 
VIVLLRHPED PQPLIAEGSW EGTITTEPRG DGGFGYNPVF LDPVYGLTAA EMDSALKNRL 
SHRAVALATL QHKLHALSL