Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02364 |
Symbol | |
ID | 6307601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 4213134 |
End bp | 4215272 |
Gene Length | 2139 bp |
Protein Length | 712 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642641339 |
Product | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase ((ppGpp)ase) |
Protein accession | YP_001915187 |
Protein GI | 188578258 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGTCTC CGTCTTCCGA CCAGGCCATT CCCGACTACG TCCTGCACCT CGAACGCGCG GCCAGCTACC TGCCCAAGGA GCAGCTGCCG ATCCTGCGGC GTGCCTGGGA AGTCGGTGCC ACTGCGCATG CCGGGCAAAC CCGCAAATCA GGCGAGCCAT ACATCACCCA CCCGGTGGCG GTGGCCGGCG TACTGGCCGA GCTGGGCCTG GACATGGAAT CGCTGATCGC GGCGATCCTG CACGACACCA TCGAAGACAC TCCGCTGACG CGGGAAGAAC TGGCGTTCGA GTTCGGCGAA GCAGTGGCCG AGCTGGTAGA TGGCGTCACC AAGCTGGACA AGCTCAAGTT CCGTGATCGT CAGGAAGCGG CGGCGGAAAG CTTCCGCAAG ATGCTGCTGG CGATGTCGCG CGATCTGCGC GTGATCATGA TCAAGCTGGC AGACCGCCTG CACAACATGC GCACGCTCGG CGCACAGAGC ACCGAAGCGC GCGGCCGCAT CGCCCGCGAG ACGCTGGAAA TCTACGCACC CATCGCGCAG CGCTTGGGCA TGAGCCTGAT CAAGTCTGAG CTGCAGAACC TGGGCTTCCG CGCCTTGTAT CCGTGGCGCC ACGCCATCAT CGAAAAACAC ATTCGCAGCC AGCCAGTGGT ACGGCGCGAA TCGATGGCGC AGGTGGAAGT GCAGCTGTCG CAGCGGCTGG CCAAGGAAGG GTTGGAGCAT CGGCTGGTCA GCCGCATCAA GACGCCCTGG AGCATCTATT CCAAGATGCA CGAAGAGAAC AAATCCTTCG ACCAGGTAAT GGACGTGTTC GGCTTTCGCC TGGTGGTGCG CACGGTGGCC GATTGCTATC ACGCGCTTGG TGCGGTGCAT GCCAGCTTCA AGCCGCTGGA CGGGCGTTTC CGCGATTTCA TCGCGATCCC CAAGGCCAAC GGCTATCAGT CGTTGCACAC CGTGTTGTTC GGACCGTACG GCTCGCCGAT CGAAGTGCAG ATCCGCACCG AAGAGATGGA TCTGATCGCT GAGCGTGGCG TGGCTGCGCA CTGGACCTAC AAGGTCGGCT CGGCCTCGCC CAATAGCGCG CAGAGTCGCG CGCACGACTG GATCGTGGAG CTGATCGATT CGCAGCGCGC CGCTGGTTCG TCGCTGGAAT TTCTCGACAA CGTCAAGGTC GACCTGTTCC CGGACGAGGT CTATCTGTTC ACGCCCAAGG GCAAGATCCT GGCATTGCCG CGCAATTCCA CCGCGCTGGA TTTCGCTTAC GCGGTGCATA CCGATGTGGG CAACCGCGCT GTGGCCTCGC GCGTGGATAA AAAGCTGGTG CCGTTGCGCA CCAAGCTGGT CAGCGGCCAG GCGGTGGAGA TCATCACGGC GCGTTCGGCC ACGCCCAAGC CCCAGTGGCT GGAGTTCGTG GTCAGCAGCA AGGCGCGCAC GGCGATCCGT TACCAGCTCA AGCAGCTCGA ACACGAAGAC GCCGTGCAGC TGGGTCACCG CATGCTGGAC CGCGCGCTGG AAGCGATGGA CTCCTCGCTG GAGCGGCTGC CCAAAGGTCG CCTGGACGCC TTTCTCAACG AGCACCGCTA TCCGCGTCTG GAAGCGTTGC TGGCCGATGT GGCGCTCGGC AACTTGATGC CGAATCAGGC CGCGCAGGCG TTGATGGCCT ATGCGGAGAT GCGTGGCGGC GGCCATTCCA AGCATTCGCA CGAAAAGATT CTGATCGACG GCAGCGAACG CGGCGTGATC AGCTTCGCCA ACTGTTGTCA GCCAATTCCC GGCGACGAAA TCATGGGGTA TCACACCGCC GGCAAGGGAA TCGTGGTGCA CCGCCTGGAT TGCCCGAACC TGGCCGAGCT GCGCAAATCG CCCGAGCGCT GGGTGCCGAT CGACTGGGAT TCCAGCGTGA CCGGCGACTA CGACACCGCG CTGGTGGTCG AAGTGGAAAA TCGCACCGGC GTGCTGGCGC AGTTGGCCGC AGCGATCGCG CAGAGCCAGT CCAACATCGA GCGCGTGGAC TATCTGGACC GCGACTTCAA TGCCGCGGTG CTGCGTTTCA ACATCCAGGT GCGCGACCGC CGCCATCTGG CCGAAGTGAT GCGCAGGCTG CGGCGTCTGC ACGTGGTGCA GAGCGTGGGG CGGCAGTAG
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Protein sequence | MTSPSSDQAI PDYVLHLERA ASYLPKEQLP ILRRAWEVGA TAHAGQTRKS GEPYITHPVA VAGVLAELGL DMESLIAAIL HDTIEDTPLT REELAFEFGE AVAELVDGVT KLDKLKFRDR QEAAAESFRK MLLAMSRDLR VIMIKLADRL HNMRTLGAQS TEARGRIARE TLEIYAPIAQ RLGMSLIKSE LQNLGFRALY PWRHAIIEKH IRSQPVVRRE SMAQVEVQLS QRLAKEGLEH RLVSRIKTPW SIYSKMHEEN KSFDQVMDVF GFRLVVRTVA DCYHALGAVH ASFKPLDGRF RDFIAIPKAN GYQSLHTVLF GPYGSPIEVQ IRTEEMDLIA ERGVAAHWTY KVGSASPNSA QSRAHDWIVE LIDSQRAAGS SLEFLDNVKV DLFPDEVYLF TPKGKILALP RNSTALDFAY AVHTDVGNRA VASRVDKKLV PLRTKLVSGQ AVEIITARSA TPKPQWLEFV VSSKARTAIR YQLKQLEHED AVQLGHRMLD RALEAMDSSL ERLPKGRLDA FLNEHRYPRL EALLADVALG NLMPNQAAQA LMAYAEMRGG GHSKHSHEKI LIDGSERGVI SFANCCQPIP GDEIMGYHTA GKGIVVHRLD CPNLAELRKS PERWVPIDWD SSVTGDYDTA LVVEVENRTG VLAQLAAAIA QSQSNIERVD YLDRDFNAAV LRFNIQVRDR RHLAEVMRRL RRLHVVQSVG RQ
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