Gene PXO_02364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_02364 
Symbol 
ID6307601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp4213134 
End bp4215272 
Gene Length2139 bp 
Protein Length712 aa 
Translation table11 
GC content63% 
IMG OID642641339 
Productguanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase ((ppGpp)ase) 
Protein accessionYP_001915187 
Protein GI188578258 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGTCTC CGTCTTCCGA CCAGGCCATT CCCGACTACG TCCTGCACCT CGAACGCGCG 
GCCAGCTACC TGCCCAAGGA GCAGCTGCCG ATCCTGCGGC GTGCCTGGGA AGTCGGTGCC
ACTGCGCATG CCGGGCAAAC CCGCAAATCA GGCGAGCCAT ACATCACCCA CCCGGTGGCG
GTGGCCGGCG TACTGGCCGA GCTGGGCCTG GACATGGAAT CGCTGATCGC GGCGATCCTG
CACGACACCA TCGAAGACAC TCCGCTGACG CGGGAAGAAC TGGCGTTCGA GTTCGGCGAA
GCAGTGGCCG AGCTGGTAGA TGGCGTCACC AAGCTGGACA AGCTCAAGTT CCGTGATCGT
CAGGAAGCGG CGGCGGAAAG CTTCCGCAAG ATGCTGCTGG CGATGTCGCG CGATCTGCGC
GTGATCATGA TCAAGCTGGC AGACCGCCTG CACAACATGC GCACGCTCGG CGCACAGAGC
ACCGAAGCGC GCGGCCGCAT CGCCCGCGAG ACGCTGGAAA TCTACGCACC CATCGCGCAG
CGCTTGGGCA TGAGCCTGAT CAAGTCTGAG CTGCAGAACC TGGGCTTCCG CGCCTTGTAT
CCGTGGCGCC ACGCCATCAT CGAAAAACAC ATTCGCAGCC AGCCAGTGGT ACGGCGCGAA
TCGATGGCGC AGGTGGAAGT GCAGCTGTCG CAGCGGCTGG CCAAGGAAGG GTTGGAGCAT
CGGCTGGTCA GCCGCATCAA GACGCCCTGG AGCATCTATT CCAAGATGCA CGAAGAGAAC
AAATCCTTCG ACCAGGTAAT GGACGTGTTC GGCTTTCGCC TGGTGGTGCG CACGGTGGCC
GATTGCTATC ACGCGCTTGG TGCGGTGCAT GCCAGCTTCA AGCCGCTGGA CGGGCGTTTC
CGCGATTTCA TCGCGATCCC CAAGGCCAAC GGCTATCAGT CGTTGCACAC CGTGTTGTTC
GGACCGTACG GCTCGCCGAT CGAAGTGCAG ATCCGCACCG AAGAGATGGA TCTGATCGCT
GAGCGTGGCG TGGCTGCGCA CTGGACCTAC AAGGTCGGCT CGGCCTCGCC CAATAGCGCG
CAGAGTCGCG CGCACGACTG GATCGTGGAG CTGATCGATT CGCAGCGCGC CGCTGGTTCG
TCGCTGGAAT TTCTCGACAA CGTCAAGGTC GACCTGTTCC CGGACGAGGT CTATCTGTTC
ACGCCCAAGG GCAAGATCCT GGCATTGCCG CGCAATTCCA CCGCGCTGGA TTTCGCTTAC
GCGGTGCATA CCGATGTGGG CAACCGCGCT GTGGCCTCGC GCGTGGATAA AAAGCTGGTG
CCGTTGCGCA CCAAGCTGGT CAGCGGCCAG GCGGTGGAGA TCATCACGGC GCGTTCGGCC
ACGCCCAAGC CCCAGTGGCT GGAGTTCGTG GTCAGCAGCA AGGCGCGCAC GGCGATCCGT
TACCAGCTCA AGCAGCTCGA ACACGAAGAC GCCGTGCAGC TGGGTCACCG CATGCTGGAC
CGCGCGCTGG AAGCGATGGA CTCCTCGCTG GAGCGGCTGC CCAAAGGTCG CCTGGACGCC
TTTCTCAACG AGCACCGCTA TCCGCGTCTG GAAGCGTTGC TGGCCGATGT GGCGCTCGGC
AACTTGATGC CGAATCAGGC CGCGCAGGCG TTGATGGCCT ATGCGGAGAT GCGTGGCGGC
GGCCATTCCA AGCATTCGCA CGAAAAGATT CTGATCGACG GCAGCGAACG CGGCGTGATC
AGCTTCGCCA ACTGTTGTCA GCCAATTCCC GGCGACGAAA TCATGGGGTA TCACACCGCC
GGCAAGGGAA TCGTGGTGCA CCGCCTGGAT TGCCCGAACC TGGCCGAGCT GCGCAAATCG
CCCGAGCGCT GGGTGCCGAT CGACTGGGAT TCCAGCGTGA CCGGCGACTA CGACACCGCG
CTGGTGGTCG AAGTGGAAAA TCGCACCGGC GTGCTGGCGC AGTTGGCCGC AGCGATCGCG
CAGAGCCAGT CCAACATCGA GCGCGTGGAC TATCTGGACC GCGACTTCAA TGCCGCGGTG
CTGCGTTTCA ACATCCAGGT GCGCGACCGC CGCCATCTGG CCGAAGTGAT GCGCAGGCTG
CGGCGTCTGC ACGTGGTGCA GAGCGTGGGG CGGCAGTAG
 
Protein sequence
MTSPSSDQAI PDYVLHLERA ASYLPKEQLP ILRRAWEVGA TAHAGQTRKS GEPYITHPVA 
VAGVLAELGL DMESLIAAIL HDTIEDTPLT REELAFEFGE AVAELVDGVT KLDKLKFRDR
QEAAAESFRK MLLAMSRDLR VIMIKLADRL HNMRTLGAQS TEARGRIARE TLEIYAPIAQ
RLGMSLIKSE LQNLGFRALY PWRHAIIEKH IRSQPVVRRE SMAQVEVQLS QRLAKEGLEH
RLVSRIKTPW SIYSKMHEEN KSFDQVMDVF GFRLVVRTVA DCYHALGAVH ASFKPLDGRF
RDFIAIPKAN GYQSLHTVLF GPYGSPIEVQ IRTEEMDLIA ERGVAAHWTY KVGSASPNSA
QSRAHDWIVE LIDSQRAAGS SLEFLDNVKV DLFPDEVYLF TPKGKILALP RNSTALDFAY
AVHTDVGNRA VASRVDKKLV PLRTKLVSGQ AVEIITARSA TPKPQWLEFV VSSKARTAIR
YQLKQLEHED AVQLGHRMLD RALEAMDSSL ERLPKGRLDA FLNEHRYPRL EALLADVALG
NLMPNQAAQA LMAYAEMRGG GHSKHSHEKI LIDGSERGVI SFANCCQPIP GDEIMGYHTA
GKGIVVHRLD CPNLAELRKS PERWVPIDWD SSVTGDYDTA LVVEVENRTG VLAQLAAAIA
QSQSNIERVD YLDRDFNAAV LRFNIQVRDR RHLAEVMRRL RRLHVVQSVG RQ