Gene PXO_02232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_02232 
Symbol 
ID6307451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand+ 
Start bp4050231 
End bp4051232 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content70% 
IMG OID642641190 
Productarabinose 5-phosphate isomerase 
Protein accessionYP_001915038 
Protein GI188578109 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain
[COG0794] Predicted sugar phosphate isomerase involved in capsule formation 
TIGRFAM ID[TIGR00393] KpsF/GutQ family protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTCT CGCGCCTGCC TTCCGCCACC GTCAGCGACG CCAGTCTGGT TGCCAGCGGT 
CAGCGCGTGC TGGAGATCGA GCGCGAGGCG CTGGCCAACG TGGGCGCGCG CATCGGCAGC 
GAGTTCGCCG CGGCCTGCCG GCTGGTGCTG GCCTCGCGCG GGCGGGTGGT CGCCACCGGC 
ATGGGCAAGT CCGGCCATGT GGCGCGCAAG ATCGCTGCCA CCCTCGCCTC CACCGGCACT 
CCGGCGTTCT TCGTGCACCC CGGCGAAGCC GGCCATGGCG ACCTGGGCAT GATCACCGAG 
GCCGACATCG TGCTGGCGCT GTCGTATTCG GGGGAATCGG ACGAAGTGCG CATGCTGCTG 
CCGGTGCTCA AGCGCCAGGG CAACCCGATC ATCGCCATGA CCGGCCGCAC CAGTTCCACC 
CTGGCCCAGG CCGCCGACGT GCACCTGGAC GTCAGCGTCT CCGCCGAGGC CTGCCCGTTG 
CATCTGGCAC CCACCTCCAG CACCACCGCC TCGCTGGCGA TGGGCGATGC GCTGGCAGTC 
GCCTTGCTCG ATGCGCGCGG CTTCACCGCC GACGACTTCG CGCGTTCGCA TCCGGCCGGC 
AGCCTGGGCC GGCGCCTGCT GCTGCACATC ACCGACGTGA TGCATGCCGG CGACGACCTG 
CCGCGTGTGC GTGAAGACGC CAGCCTGAGC GAGGCGCTGA TGGAAATGAG CCGCAAGCGG 
CTGGGCATGA CCGCCGTGGT GGACAACGAC GAGCGCCTGA TCGGGCTGTT CACCGACGGC 
GACCTGCGCC GCGCACTGGA CAGCGACATC GACGTGCGCA GCGCCGGCAT CGCACAGGTG 
ATGACGCGCA ACCCGCGCAC CATCGGCGCC GACCAGCTGG CCGCCGAGGC GGCGCGGCTG 
ATGGAGGACT ACAAGATCAA CGGCCTGATC GTGGTCGATG CGCAGCAGCG CGCGGTGGGC 
GCATTGAACA TTCACGACCT GTTGCGCGCC AAGGTGGTTT AA
 
Protein sequence
MAVSRLPSAT VSDASLVASG QRVLEIEREA LANVGARIGS EFAAACRLVL ASRGRVVATG 
MGKSGHVARK IAATLASTGT PAFFVHPGEA GHGDLGMITE ADIVLALSYS GESDEVRMLL 
PVLKRQGNPI IAMTGRTSST LAQAADVHLD VSVSAEACPL HLAPTSSTTA SLAMGDALAV 
ALLDARGFTA DDFARSHPAG SLGRRLLLHI TDVMHAGDDL PRVREDASLS EALMEMSRKR 
LGMTAVVDND ERLIGLFTDG DLRRALDSDI DVRSAGIAQV MTRNPRTIGA DQLAAEAARL 
MEDYKINGLI VVDAQQRAVG ALNIHDLLRA KVV