Gene PXO_02196 details

Gene Information

• Locus tag: PXO_02196
• Symbol: soxR
• ID: 6307488
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: -
• Start bp: 4087768
• End bp: 4088214
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642641227
• Product: redox-sensitive transcriptional activator SoxR
• Protein accession: YP_001915075
• Protein GI: 188578146
• COG category: [K] Transcription
• COG ID: [COG0789] Predicted transcriptional regulators
• TIGRFAM ID: [TIGR01950] redox-sensitive transcriptional activator SoxR

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGCGCG CGTTGTCCGT GGGCGAGGTG GCCAAGCGCA GTTGCGTGGC GGTGTCGGCG 
CTGCACTTTT ATGAGCGCAA GGGCTTGATC AGTAGCCTGC GCACCGCTGG CAACCAGCGC 
CGCTATGCGC GCGATGTGCT GCGGCGGATC GCGTTGATTC GCGTGGCGCA GCGGCTCGGT 
GTGCCGCTGC AACAAGTGCT CGATGCCTTC TCTGTCTTGC CGGAGCACGG TACGCCCACG 
CGTGCGGAGT GGGCGCGGAT GTCGGCGCGC TGGCGGGGTC AACTGGATGC GTGCATCAAC 
GAACTGCAGG CCCTGCGCGA CCAGCTCACC GACTGCATCG GCTGCGGTTG TCTGTCGCTG 
CGCCGCTGCC GCCTGAGCAA TCCGGACGAT GCCATGGGTC AGCGAGGTGA GGGAGCATTG 
CGACTGGGTA GCCTGATCGT GGACTAA 

 

Protein sequence

MQRALSVGEV AKRSCVAVSA LHFYERKGLI SSLRTAGNQR RYARDVLRRI ALIRVAQRLG 
VPLQQVLDAF SVLPEHGTPT RAEWARMSAR WRGQLDACIN ELQALRDQLT DCIGCGCLSL 
RRCRLSNPDD AMGQRGEGAL RLGSLIVD