Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02143 |
Symbol | ffh |
ID | 6307418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 4022033 |
End bp | 4023415 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642641158 |
Product | signal recognition particle protein |
Protein accession | YP_001915006 |
Protein GI | 188578077 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCATGT TCGAGTCCCT TACCCAACGT CTCTCCGGCA CCATGGAGCG CCTGCGCGGC CGCGGCCGCC TGACCGAGGA GAACATCCGC GAAGCCACCC GTGAAGTGCG CATCGCGCTG CTCGAAGCCG ACGTCGCGCT GCCGGTGGTG CAGGCGCTGA TCGAGCGCAT CAAGGTGCGG GCTGTCGGCC AGGAAGTACT CAAGTCGCTC ACCCCGGGCC AGGCGCTGAT CAAAATCGTG CGCGACGAGC TCACTGCCGT CATGGGCGCC GCCGCTGCCG ACGTCAATCT CAACGTGCCG GCCCCGGCAA TCGTCCTGAT GGCCGGCCTG CAGGGTGCGG GCAAGACCAC CACGGTCGGC AAGCTCGCCA AGCACCTGAA GGAAAAGCGC AAGAAAAAGG TCATGGTGGT CTCGGCCGAC GTCTACCGCC CGGCCGCGAT CGAGCAGCTC AAGACCCTGG CCGAACAGGT CGGCGTGCTG TTCTTCGCCT CCGACGCCTC GCAGAAGCCC GTCGACATCG TGCGCGCGGC CATCAGCGAT GCGCGCAAGT CGTTCGTCGA CGTGCTGCTG GTCGATACCG CCGGCCGTCT GGCGATCGAT CAGGTAATGA TGGACGAGAT CAAGGCGCTG CACGCCGCGG TCAACCCCAC CGAAACCCTG TTCGTGGTCG ATGCGATGAC CGGTCAGGAT GCGGCCAACA CCGCCAAGGC CTTCGGCGAG GCGCTGCCGC TGACCGGCGT GGTGCTGACC AAGACCGACG GCGACGCCCG CGGCGGTGCC GCGCTGAGCG TGCGCTATAT CACCGGCAAG CCGATCAAGT TCGTCGGTAC CGGCGAAAAG ACCGACGGCC TGGATGTGTT CCATCCGGAT CGCGTCGCCA GCCGTATTCT GGACATGGGC GACGTGCTGT CGCTGGTGGA GCAGGTCGAG CACAGCGTCG ATCAGGAAAA GGCCGCCAAA CTGGCCGCCA AGGTCGCCAA GGGCAAGAAG TTCGACCTCA ACGACATGAA AGAGCAGCTC GAGCAAATGC AGAACATGGG CGGCATCCAT GGGCTGATGG ACAAGCTGCC GGGCATGGGT CAGATCTCGG ATAACGTGAA GCAGCAGGTC ACCGGCAAGG AAGTGCCGCG CATGATCGCC ATCATCAACT CGATGACCAA GAAAGAGCGC CGCAACCCGA CCCTGCTCAA CGGCTCGCGC CGCGCACGCA TCGCCCGCGG CTCGGGCATG CAGCCGGCCG ACGTCAACAA GCTGATGAAG CAGTACCAGC AGATGGAAAA GATGATGGGC AAGCTGGCCG GCGGCGGCAT GAAGGGCCTG ATGCGCAATA TGAAGGGCAT GATGGGCGCC ATGGGCGGCC GTGGCGGCAT GCCTTTCCGC TGA
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Protein sequence | MRMFESLTQR LSGTMERLRG RGRLTEENIR EATREVRIAL LEADVALPVV QALIERIKVR AVGQEVLKSL TPGQALIKIV RDELTAVMGA AAADVNLNVP APAIVLMAGL QGAGKTTTVG KLAKHLKEKR KKKVMVVSAD VYRPAAIEQL KTLAEQVGVL FFASDASQKP VDIVRAAISD ARKSFVDVLL VDTAGRLAID QVMMDEIKAL HAAVNPTETL FVVDAMTGQD AANTAKAFGE ALPLTGVVLT KTDGDARGGA ALSVRYITGK PIKFVGTGEK TDGLDVFHPD RVASRILDMG DVLSLVEQVE HSVDQEKAAK LAAKVAKGKK FDLNDMKEQL EQMQNMGGIH GLMDKLPGMG QISDNVKQQV TGKEVPRMIA IINSMTKKER RNPTLLNGSR RARIARGSGM QPADVNKLMK QYQQMEKMMG KLAGGGMKGL MRNMKGMMGA MGGRGGMPFR
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