Gene PXO_02070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_02070 
Symbol 
ID6307246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp3833299 
End bp3835680 
Gene Length2382 bp 
Protein Length793 aa 
Translation table11 
GC content58% 
IMG OID642640991 
Producttype I restriction enzyme EcoAI R protein 
Protein accessionYP_001914839 
Protein GI188577910 
COG category[V] Defense mechanisms 
COG ID[COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAGT CGTCGTTAAC CGAGCGCGAT ATCTGCACGA AATTCATCAT TCCGTCGATC 
GTCGCTGCGG GCTGGGATCT GGATCTCCAG GTGCGCGAAG AGTTCGCTTT TACCAAGGGG
CGTGTCGTCG TTCGCGGCAA GCTGCACAGC CGAGGGGTGG CGCGTCGTGC AGACTTCGTA
CTGTACCACC GCGCCAATCT CCCTTTGGCC GTGATCGAGG CAAAGGACAA CACGCATACC
GTTGGTTCCG GCATGCAACA GGCGCTGGGA TATGCAGATG CGCTGGATGT TCCGTTTGTG
TTCTCAAGCA ACGGCGACGG ATTCCTTTTC CACGATAGAA CCGCAACCGG CGACAAGGTC
GAATCCGAAC TGACGTTGGA TCAGTTTCCC TCACCAGAGG AACTGTGGCG TCGCTATTGC
CTTTGGAAAG GGCTTGGTGA GGACGCGCGA CAGGTGGTCG AGTCCCCGTA CTACGATGAT
GGCAGCAGTC GGTCGCCGCG CTACTACCAG ATCAATGCGA TCAATCGGAC GATCGAAGCT
GTGGCCAATG GTCAAAACCG CATCCTGCTG GTGATGGCCA CCGGAACCGG CAAAACCTAT
ACCGCTTTCC AGATCATCTG GCGGCTTTGG AAGTCGCGCC AGAAGAAGCG CATCCTGTTT
CTGGCTGATC GCAACATCTT GGTCGATCAG ACAAAAAACA ACGATTTCAA GCCGTTCGGC
ACGGCGATGA CCAAGATCAC CAAGCGCCAG ATCGATACGT CTTACGAAAT CTACCTGTCC
CTGTACCAGG CGGTGACCGG CGTAGAGGAC GTCAAGAACA TCTATAAGCA GTTCTCTCGG
GAATTCTTTG ACCTTGTCGT CATCGATGAA TGCCATCGTG GCAGCGCGGC TGAGGATTCT
GCGTGGCGGG AGATCCTGGA GTATTTCTCT GGTGCCACGC ATATCGGCCT GACCGCAACG
CCAAAGGAGA CCAAGGAGGT CTCCAGCAGT ACTTACTTTG GAGAGCCCGT CTACAGCTAC
ACGCTCAAGC AGGGCATCGA TGACGGCTTC CTGGCACCGT ACAAGGTGGT GCGCATCGAC
TTCGATGTCG ATCTGCAGGG CTGGCGGCCA CCCAAGGGAA TGCGCGACAA AAACGGCGAG
TTGATCGAAG ATCGCATCTA CAACCTGCGC GACATGGATC GCCAGCTCGT GGTCGAAGCG
CGGACGTATC TGGTCGCGCA GAAGGTCACC GAATTCCTCA CTGCCACCGG TCCATTCCAG
AAGACCATTG TGTTCTGTGA CGACATCGAT CATGCCGAAC GTATGCGCCA GGCCCTGGTG
AATCTCAATT CGCAGCGTGT CGCGGAAAAT CGCAAGTACG TCATGCGCAT CACCGGCGAT
GACAACGAGG GAAAGGCCGA ACTCGATAAT TTCATCAATC CGGAAATGCG CTACCCCGTT
ATCGCCACCA CCAGCAAGCT GATGACAACC GGCGTTGATG CGCAAACCTG CAAGCTCATC
GTGCTGGACC AGCACATCAG GTCGATGACC GAGTTCAAGC AGATCATCGG TCGCGGGACG
CGCATCAATG AACACTACGA CAAGTACTGG TTCACCATCA TGGATTTCAA GAAGGCGACC
GAACTGTTCG CTGATCCATC GTTCGATGGA GACCCGGAGG TGATCTACAA CCCCTCGCCC
AATGACAGTC CGGTACCGCC TGAGATCGGC GGCGGCGAGG GTGGCGACGG CGGTGTGGTC
GGCGATCCTC CAGATGGCGG TGATGACGTC ACCACCGGAG GTGACGGTGA GCCGAAGCGC
ATCAAATACG TCATCGACAA ACTGCCGGTA TCGGTCGTGG CCGAGCGCGT CCTGTATTAC
GGATCCGATG GCAAGCTCAT CACCGAGTCG CTGCGCGACT ACACCCGCGA ACGCGTCCTG
CGTCAGTTCG CCTCGCTCGA TGAGTTCCTG CGGCGCTGGA GCGATGCCCA GCAGAAGAAG
GCCATCATCG ATGAGCTGGC TACGCAGGGC GTGTTATGGG GAGAGCTGGC CGGCGAGGTC
GAGAAGAAGC TCGGCCAGTC GCTGGATCCG TTCGATCTGA TCTGCCACGT GGCCTTCGAT
CAACCGCCGC TGTCGCGCAG GGAGCGAGCA GAGGGTGTGC GCAAGCGCAA TTACTTCGCC
AGGTATCAGG GCAAGGCGCG GCAGGTACTC GAAGGCTTGC TGGACAAGTA CGCCGACACT
GGGGTGGAGC ACATCGAGGA CATCAGGATC CTGCAGCTCG ACCCGTTCCG CACCCTTGGA
GCCCCGGTCG AACTTGTGGC GGCCTTCGGC GGCAAGGCGA ATTACCAGCA GGCCATCCTG
GACCTGGAAA GCCAGCTATA CAGCGGTGCG GACGTTGCCT GA
 
Protein sequence
MDKSSLTERD ICTKFIIPSI VAAGWDLDLQ VREEFAFTKG RVVVRGKLHS RGVARRADFV 
LYHRANLPLA VIEAKDNTHT VGSGMQQALG YADALDVPFV FSSNGDGFLF HDRTATGDKV
ESELTLDQFP SPEELWRRYC LWKGLGEDAR QVVESPYYDD GSSRSPRYYQ INAINRTIEA
VANGQNRILL VMATGTGKTY TAFQIIWRLW KSRQKKRILF LADRNILVDQ TKNNDFKPFG
TAMTKITKRQ IDTSYEIYLS LYQAVTGVED VKNIYKQFSR EFFDLVVIDE CHRGSAAEDS
AWREILEYFS GATHIGLTAT PKETKEVSSS TYFGEPVYSY TLKQGIDDGF LAPYKVVRID
FDVDLQGWRP PKGMRDKNGE LIEDRIYNLR DMDRQLVVEA RTYLVAQKVT EFLTATGPFQ
KTIVFCDDID HAERMRQALV NLNSQRVAEN RKYVMRITGD DNEGKAELDN FINPEMRYPV
IATTSKLMTT GVDAQTCKLI VLDQHIRSMT EFKQIIGRGT RINEHYDKYW FTIMDFKKAT
ELFADPSFDG DPEVIYNPSP NDSPVPPEIG GGEGGDGGVV GDPPDGGDDV TTGGDGEPKR
IKYVIDKLPV SVVAERVLYY GSDGKLITES LRDYTRERVL RQFASLDEFL RRWSDAQQKK
AIIDELATQG VLWGELAGEV EKKLGQSLDP FDLICHVAFD QPPLSRRERA EGVRKRNYFA
RYQGKARQVL EGLLDKYADT GVEHIEDIRI LQLDPFRTLG APVELVAAFG GKANYQQAIL
DLESQLYSGA DVA