| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01922 |
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| Symbol | |
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| ID | 6307179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3756264 |
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| End bp | 3757220 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642640925 |
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| Product | RND efflux membrane fusion protein |
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| Protein accession | YP_001914773 |
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| Protein GI | 188577844 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGCGG TGACCACCCA ACCCTGGAAC TCGACCGTGC AGTCGATCGC CACGGTGCGT
GCGCGCGAAT CGGTGGCGCT CACCGCTGCG GTCAGCGATG TGGTGGAGCA GGTGTATTTC
GACAGCGGCG ACGAGGTCAA GGCCGGGCAA TTGCTGCTGC GTTTGCGCGG CAATTCGCAA
CAGGCGGCAC TGACCGCCGC ACAGGCCACC TTCGAAGAAA CCGACCAGTT GTATCGCCGG
CAGTCGAGTC TGGTTGGCCA GCAACTGGTG GCCAAATCCA CCGTGGATAC GCAGCGTGCG
CTACGCGATG CCGCGCAGGC GCGTGTGCAG CAGATGCGCG CGGAAATCAC CGACCGCGAG
GTGCGCGCCC CGTTTTCCGG CGTACTCGGC ATTCGCCAGA TCAGTCCTGG CGCGTTGATC
ACCTCCAGCA CGGTGATCGC CACATTGGAC GATGTGGCGC GCATGTACGT GGATTTCCAG
GTGCCAGAAT CGCAATTCGG CCTAGTGCAG GTCGGCAATT CGGTCAGCGG CAGCGCAGCG
GCCTATCCCG GCGCGCTGTT CGAAGGCGAA GTGGTGACCA TCGATTCGCG GATCGACGAG
ACCACGCGCT CGGTGACGGT ACGCGCGGAT TTCCCCAACG ACGATCGCCG GCTGCGGCCA
GGCATGCTGC TGGATGTGCG GCTGTTCCAG CCGGCGCGGC AGGCGGTGGT GATCCCGGAA
ATTGCGGTGG TGCAGGTGGG GCGCGAGTCG TATGTGTTCC GGGTCAAGCC CGATAGCAGC
GTGGAGCGCG CCGATGTGCG CGTGGGCGAG CGGCGCGATG GCAAGGTGGA AATTCTCGAA
GGCGTCAAAG CCGGTGAGCG TATCGTGGTG GATGGCACCG GCAAGCTGCG TGTGGGCTTG
AAGGTCGTGG ACCAGGCACC GCCTGCGTCG ACCCGCCCGC AGGCGGCAGC ACAATGA
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| Protein sequence | MQAVTTQPWN STVQSIATVR ARESVALTAA VSDVVEQVYF DSGDEVKAGQ LLLRLRGNSQ
QAALTAAQAT FEETDQLYRR QSSLVGQQLV AKSTVDTQRA LRDAAQARVQ QMRAEITDRE
VRAPFSGVLG IRQISPGALI TSSTVIATLD DVARMYVDFQ VPESQFGLVQ VGNSVSGSAA
AYPGALFEGE VVTIDSRIDE TTRSVTVRAD FPNDDRRLRP GMLLDVRLFQ PARQAVVIPE
IAVVQVGRES YVFRVKPDSS VERADVRVGE RRDGKVEILE GVKAGERIVV DGTGKLRVGL
KVVDQAPPAS TRPQAAAQ
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