| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01718 |
|---|
| Symbol | era |
|---|
| ID | 6306599 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 3166525 |
|---|
| End bp | 3167382 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642640353 |
|---|
| Product | GTP-binding protein Era |
|---|
| Protein accession | YP_001914210 |
|---|
| Protein GI | 188577281 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1159] GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.515078 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCGGCC GGCCCAACGT CGGCAAGTCC ACCCTGACCA ATGCCCTGGT CGGCGCGAAG
GTCAGCATCG TCTCCAACCG GCCCCAGACC ACGCGCCATC GGTTGCTGGG CATCGCGACC
TTCCCGGAAG GGCAATTGGT GCTGGTCGAT ACCCCAGGCC TGCACCGCGA GCAGAAGCGC
GCAATGAACC GGGTGATGAA TCGCGCTGCG CGTGGCTCGC TTGAAGGCGT GGACGCGGCA
GTGCTGGTGA TCGAAGCCGG CCGCTGGGAC GAGGAAGATA CCCTGGCGTT TCGCGTGCTC
AGCGACGCCG AGGTGCCGGT GGTGCTGGTG GTCAACAAGG TTGACCGCCT CAAGGACAAG
ACCGCGCTGT TGCCGTTCCT GGCCCAGGTC AGCGAGGGAC GTACCTTCGC GGCCGTGCAT
CCGGTATCCG CCCTCAAGCG CAAGGGCCTG GAAGCGTTGG TCGGCGATCT GCTCAAGCTG
GTACCCGAAG CCGAGGCCAT GTTTGGCGAA GACGAGATCA CCGATCGCAG CCAGCGCTTC
CTGGCCGGCG AGTTGGTGCG CGAGCAGCTG ATGCGTCAGC TCGGCGAAGA ACTGCCGTAT
GCCACCACCG TTGAGATCGA GCGCTTCGCC GAAGATGGCG CGCTGCTGCG GATCGGAGCG
GTCATCTGGG TCGAACGCGA AGGCCAGAAG GCGATCGTGA TTGGCAAGGG CGGCACCCGC
CTGAAGGAAA TCGGCGGCAA GGCGCGTCTG CAAATGGAGC GCCTGTTCGG TGCCAAGGTC
TTCCTCGAAA CCTGGGTACG CGTGCGCGAG GGCTGGTCGG ACGACGAGGC TGCGCTGAAG
GCGTTCGGCT ACGAATGA
|
|---|
| Protein sequence | MIGRPNVGKS TLTNALVGAK VSIVSNRPQT TRHRLLGIAT FPEGQLVLVD TPGLHREQKR
AMNRVMNRAA RGSLEGVDAA VLVIEAGRWD EEDTLAFRVL SDAEVPVVLV VNKVDRLKDK
TALLPFLAQV SEGRTFAAVH PVSALKRKGL EALVGDLLKL VPEAEAMFGE DEITDRSQRF
LAGELVREQL MRQLGEELPY ATTVEIERFA EDGALLRIGA VIWVEREGQK AIVIGKGGTR
LKEIGGKARL QMERLFGAKV FLETWVRVRE GWSDDEAALK AFGYE
|
|---|
| |