| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01640 |
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| Symbol | |
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| ID | 6306676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 3256039 |
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| End bp | 3258621 |
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| Gene Length | 2583 bp |
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| Protein Length | 860 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642640429 |
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| Product | beta-mannosidase |
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| Protein accession | YP_001914286 |
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| Protein GI | 188577357 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.587297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGCTGG ACGCCGGCTG GCAGGTGCGG CTGGTGCCGG GCCAGGAGCA GGCCAAGACG
TATCCGAAAG CAGCGGCGTG GCTGCCGGCC CAGGTGCCGG GTGCGGTGCA GACCGACCTG
ATCGCCGCCA AGATCGTGCC CGACCCGTTC TATCGCGATA ACGAAGGCAG GATCCAGTGG
GCCGGCCTGA GCGATTGGCA GTACCAGACC CACTTCAACG TGGATGCGGC CACGCTCAAG
CGCGAACACG TGGAGCTGGT GTTCGACGGC CTGGACACGT TTGCCGAAGT CACCCTCAAC
GGCAAACAAC TGCTCAGCGC CGACAACATG TTCCGGCAGT GGCGCGTGGA TGCGAAGTCC
TTGCTCAAGC GCGGCGACAA CGTGCTGGAG GTCAAGCTCT ACTCGCCGAT CAAGAAGATC
CAGCCGTGGC TGGCCAAGCA GCCGTACGCG CTGCCGGGCG CTTATGACTC GGCCTTCGGC
GACGAGCCCG AGGCACGCCA CAGCTCCACC TATGTGCGCA AGGCGCCGTA CAACTTCGGC
TGGGACTGGG GCCCGCGCAT GGTCAACGCC GGCATCTGGA AGGATGTGCG CGTGGAAGCG
TGGGACGCCG TGCGTGTGGA TGGGCTGCAT ATCGCCCAGC AACGCGTGGA TGCCGAGAGC
GCGCAATTGC AGGCGCAGCT GGAACTGCAG GCCGGCCGCA GCGGCCCGGT GCAGGTGACG
CTGGATGTAC TGGGCCCGGA TGGGCAGAAC GTCGGCCAGT TCACCCAGGA CGCGGTGGTC
GACCCTGGTC AGAACCGCAT CGCTCTGGCC GTGCGCATCG CCAAGCCCAA GCGCTGGTTT
CCGGCCGGTT ACGGCGCGCA AGACCGCTAC ACCTTCGTGG CCAGCGTGCG CGACGCCGAT
GGCGACAGCC AACAGATCAA GCGTGTCACC GGCCTGCGTT CGGTGGAGCT GCGCCGCGAA
AAAGACACGT TCGGCAAGAG CATGGAGATC GTGATCAACG GCATCCCGAT CTTCGCCAAG
GGGGCCAACC TGATTCCGCT GGATGCCTTC CCCGCACGCG TGACGCACGA CCGCATGCGC
AGCACCTTGC AGGACGCGCG CGATGCCAAC ATGAACATGT TGCGCATGTG GGGCGGCGGA
CACTACCAGG ACGATTATTT CTACGACGTC GCCGACGCGC TGGGCATCAT GATCTGGCAG
GACTTCATGT TCGGTGGCGC GGTGCCGCCG TACGACGTGG AATTTCGCGA GAACACCCGG
CAGGAGGCGA TCGAACAGGT CAAGCGGCTG CGCGATCACC CCAGTATCGT GTTGTGGTGC
GGCAACAACG AAGTGCAGAC CGGCTGGGAA AACTGGGGCG ACCGGGTCAA GTTCAAACAA
TCGGTGGACC CGGAGGAGCG CTCCCGCATC GAACGCGGCA TGACCACCCT GTTCGGCACG
GTGTTCCGCG AAGTGGTGGC CACCTACGAT AGCGACGTGC CGTATTGGGC CACCTCGCCC
GGCACCGATT TCGACGGCGC GGCCGACCAG GCCAACGATG GCGACATGCA TTACTGGAAG
GTCTGGGGCG GCCCTGCCCT GCCGGTCACC GAATACCTCA ACGTCACCCC GCGCTTCATG
TCCGAATACG GCCTGCAGTC GTTCCCGGAT ATGCGCACCG TGCGCGCCTT CGCCGAGCCC
GGCGACCTGG ATCCGGAATC GCCGGTGATG CGTGTGCATC AGAAGTTCGA CAAGGGCAAC
GGCAACAAGC GGTTGATGCT GTACATCCGC CGCGAATTCG GCGAGCCCAA GGATTTCGAA
AGCTTCGTCT ACCTGAGCCA GCTGATGCAG GCCGAAGGCA TCCACATCGC CGCTTCGCAT
CTGCGCGCTT CGCGTCCGCA GTCGATGGGT TCGCTGTACT GGCAGCTCAA CGATGTGTGG
CCGGGTGCGT CGTGGTCCAG CGTGGACTAC TACGGCCGCT GGAAGGCGCT GCATTACCAC
GCGCGCCGTT TCTATGCGCC GGAAATGATC GCCGCGCTGC GGAACGACAA GGGCCAGACC
GAAGTGTCGC TGGTGTCCGA CCGCACCACA CCGCTGGCGG CACGCTGGCG CATGCGGGTG
ATGCGCATGG ACGGCAAGGT ACTGAGCAAG CGCGAAGACA ACGCTAGCGT CAAACCGCTG
AGCAGTCTGC AGGTCGGTAA CTTCAGCGAC AAGCAATTGC TGGGCAGCGC CGATCCGAAG
CACACCTATG CCGTGTTCGA GCTCTTCGAC GGCAACACGT TGCTGTCACG TGAAATGGTG
TTCTTCGCGC CGGCCAAGCA GCTCGCATTG CCGACCGCGA AGATCGATAG CCAGTGGCGC
ACCGATGGCG ATGGCTACGC GCTCACCCTG ACCAGCAACA CGCTGGCGCG CAACGTGTGG
CTATCGTTCG GCGATGTGGA TGCCACCCTG TCGGACAACG CCTTCGACCT GCTGCCGGGT
GAGCCGCTGA CCGTGCATGT GAGCAGCAAG GTGGCGCTGA CGCAGCTGCA ATCCGCGCTG
AAGGTGCGCG ATCTGGCTGC CACGCTGGCT GGCGCGCCGC CGGAGCCGGC CGAAGCGAAG
TAA
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| Protein sequence | MTLDAGWQVR LVPGQEQAKT YPKAAAWLPA QVPGAVQTDL IAAKIVPDPF YRDNEGRIQW
AGLSDWQYQT HFNVDAATLK REHVELVFDG LDTFAEVTLN GKQLLSADNM FRQWRVDAKS
LLKRGDNVLE VKLYSPIKKI QPWLAKQPYA LPGAYDSAFG DEPEARHSST YVRKAPYNFG
WDWGPRMVNA GIWKDVRVEA WDAVRVDGLH IAQQRVDAES AQLQAQLELQ AGRSGPVQVT
LDVLGPDGQN VGQFTQDAVV DPGQNRIALA VRIAKPKRWF PAGYGAQDRY TFVASVRDAD
GDSQQIKRVT GLRSVELRRE KDTFGKSMEI VINGIPIFAK GANLIPLDAF PARVTHDRMR
STLQDARDAN MNMLRMWGGG HYQDDYFYDV ADALGIMIWQ DFMFGGAVPP YDVEFRENTR
QEAIEQVKRL RDHPSIVLWC GNNEVQTGWE NWGDRVKFKQ SVDPEERSRI ERGMTTLFGT
VFREVVATYD SDVPYWATSP GTDFDGAADQ ANDGDMHYWK VWGGPALPVT EYLNVTPRFM
SEYGLQSFPD MRTVRAFAEP GDLDPESPVM RVHQKFDKGN GNKRLMLYIR REFGEPKDFE
SFVYLSQLMQ AEGIHIAASH LRASRPQSMG SLYWQLNDVW PGASWSSVDY YGRWKALHYH
ARRFYAPEMI AALRNDKGQT EVSLVSDRTT PLAARWRMRV MRMDGKVLSK REDNASVKPL
SSLQVGNFSD KQLLGSADPK HTYAVFELFD GNTLLSREMV FFAPAKQLAL PTAKIDSQWR
TDGDGYALTL TSNTLARNVW LSFGDVDATL SDNAFDLLPG EPLTVHVSSK VALTQLQSAL
KVRDLAATLA GAPPEPAEAK
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