Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01597 |
Symbol | |
ID | 6306715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 3311291 |
End bp | 3313318 |
Gene Length | 2028 bp |
Protein Length | 675 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642640468 |
Product | ATP-dependent helicase |
Protein accession | YP_001914325 |
Protein GI | 188577396 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCAAC TTGCCACTGT CAGCATCGAA GCGCTCAGCG AGGGTGGGGC GCTTGCGCGT CAGCTCGACG CCTTCGCGCC ACGTGCTGCG CAGTTGCGCC TGACCGGAGC GATTGCCGAG GCATTCGAGC AGCGCGATGT GTTGCTGGCA GAGGCCGGCA CCGGCACCGG CAAGACCTAC GCCTATCTGG TGCCGGCGCT GCTGTCCGGG CTCAAGACCA TCGTTTCCAC CGGCACGCGC GCGCTGCAGG ATCAGCTGTT CCATCGCGAT CTGCCGCGCG TGCGCGCCGC GCTGGGCGTG GGCCTGCGTA GCGCGTTGCT GAAGGGCCGC GCCAACTATC TGTGCAAGTA CCGCACCCAG CAGGCGCGCG GTGAGCCGCG CTTTGCCACG CCCGAACAGG TCTCGCAGTT CCAGCGCATC GTGGCCTGGA GCGGGCGCAC CCAGTCCGGC GACATGGCCG AACTCGAAGC CTTGCCCGAC GACTCGCCGC TGCTGCCGAT GGTGACCTCC ACCGTCGACA ACTGCCTGGG CACCGAATGC CCGTTCTATA GCGAGTGCTT CGTGGTGCAA GCGCGCCAGC GTGCGCAAGC GGCCGATCTG GTGGTGGTCA ATCACCATCT GCTGCTGGCC GATCTGGCGC TCAAGCAGGA AGGCTTCGGC GAAATCCTGC CTGGCGCGCA GGCCTTCGTC ATCGACGAAG CGCATCAATT GCCGGAGCTG GCGGCCAATT TCTTCGGCGA AAGTTTCGGC ATGCGGCCGT GGCAGGAGCT GGCGCGCGAC TGCATGGTCG AAGCGCGCCT GGTGGCCGGC GCGCAAGCCA GCCTGCAGGC GCCGATCCTG GCTCTGGACG ACGCCTTGCG CAGCCTGCGC GCCGGCATGG AGGGGTTGCC GGCGCGTGGC ACGCAATGGC GTGCGCTGGC CAAGCCGCAG GTGCGCGAAG GGTTCGACGC GGTGCTGTCG TCATTGGCAC GGTTGGGCCA ATCCCTGCTG CCTTTGCGTG AGGCCTCGCC TGGCTTCGAT GGCTGCACCG CACGTGCGCA AGAAGCCTTG AATCGCCTGT CGCGCTGGTT GGGCGAAGAC GTGTCAGTAG CTGATTTCGC GCAGGATCCG CCAGAAGAGA CCGTCGACAA CGATGTGCTC TGGTACGAAC TCAGCCCGCG CGGCTTCCGC TGCCAGCGCA CGCCGCTGGA TGTATCCGGC CCGTTGCGCG AGCATCGCGA AAAATCGCAT GCAGCCTGGG TATTCACCTC GGCCACGCTG GCGGTGGGCG GCGAGTTCGA CCACATTGCG CAGCGTCTGG GTTTGAATGA TCCGGTGACC TTGCTGCAAC CCAGCCCGTT CGATTGGGCG CGTCAGGCCT TGTGCTATCT GCCGCCGAAC CTGCCCGATC CGGCCGCACG CGGGTTTGGC ACTGCGCTGA TCGGTGCGTT GACGCCGGTG CTGGAAGCCT CCAAAGGCCG TGCGTTTCTA TTGTTCGCCT CGCACCGCGC GCTGCGCGAA GCGGCCGAAG CCTTGCGCGG TGCGCCGTGG CCGTTATTCG TGCAGGGTGA GGCGCCGCGC GCGACCTTGC TACAGCGCTT CCGCGATTCC GGTAACGGTG TGCTGCTGGG CTCGGCCAGT TTCCGCGAGG GCGTGGACGT GGTCGGCGAT GCCTTGAGCG TGGTGGTGAT CGACAAGCTG CCGTTCGCCG CGCCCGACGA CCCGGTGTTC GAAGCGCGCC TGGATGCGAT TCGCCGCGAG GGCGGCAACC CGTTCCGCGA CGAGCAGCTG CCGCAGGCGG TGATCGCGCT CAAGCAGGGC GTGGGTCGAC TCATTCGCAG CGAAACCGAC CGTGGCGTGC TGGTGCTGTG CGACCCGCGG CTGGTCAACA AAAGCTATGG ACGCACCTTC ATGAAATCGC TGCCGCCATT TGCGCGCACC CACGCCATAG CCGATGTGCA AGCGTTTTTT GGTGTTGCAG AGGCGGTGGG CGACAATGGC GTACTCGCGT TGCCGTTCGG CGATGATCGA TCTTCTTATT CTTTCTGA
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Protein sequence | MSQLATVSIE ALSEGGALAR QLDAFAPRAA QLRLTGAIAE AFEQRDVLLA EAGTGTGKTY AYLVPALLSG LKTIVSTGTR ALQDQLFHRD LPRVRAALGV GLRSALLKGR ANYLCKYRTQ QARGEPRFAT PEQVSQFQRI VAWSGRTQSG DMAELEALPD DSPLLPMVTS TVDNCLGTEC PFYSECFVVQ ARQRAQAADL VVVNHHLLLA DLALKQEGFG EILPGAQAFV IDEAHQLPEL AANFFGESFG MRPWQELARD CMVEARLVAG AQASLQAPIL ALDDALRSLR AGMEGLPARG TQWRALAKPQ VREGFDAVLS SLARLGQSLL PLREASPGFD GCTARAQEAL NRLSRWLGED VSVADFAQDP PEETVDNDVL WYELSPRGFR CQRTPLDVSG PLREHREKSH AAWVFTSATL AVGGEFDHIA QRLGLNDPVT LLQPSPFDWA RQALCYLPPN LPDPAARGFG TALIGALTPV LEASKGRAFL LFASHRALRE AAEALRGAPW PLFVQGEAPR ATLLQRFRDS GNGVLLGSAS FREGVDVVGD ALSVVVIDKL PFAAPDDPVF EARLDAIRRE GGNPFRDEQL PQAVIALKQG VGRLIRSETD RGVLVLCDPR LVNKSYGRTF MKSLPPFART HAIADVQAFF GVAEAVGDNG VLALPFGDDR SSYSF
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