| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01518 |
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| Symbol | |
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| ID | 6306797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3397820 |
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| End bp | 3398761 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642640547 |
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| Product | ribosomal large subunit pseudouridine synthase C |
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| Protein accession | YP_001914403 |
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| Protein GI | 188577474 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCATGC TCAAAGTTCC GGAAGACCGT GCTGGGCAGC GGCTGGATAA TTTCCTGCTT
GGCCAGCTCA AGGGTGCGCC GCGCAGCCTG ATCTACAAAC TGGTCCGCAG CGGTCAGGTG
CGGGTGAACG GCGGGCGGGC CAAGGCCGAG CGCAAGCTCG AAGGCGGCGA AGAAGTGCGG
ATTCCGCCGG TACGCGTCAA CGAAGAGGGC GACAAAGCGG CGCCGCCGTC CTCGTTCATG
GCGCGGCTGG AAGCGGCGAT CGTGTTCGAA GACGCGCGCC TGCTCGCCTT GAACAAGCCG
TCCGGGGTCG CCAGCCATGG CGGCAGCGGG ATCAGCTTCG GTGCCATCGA AACGCTGCGC
GCGCTGCGGC CGAACCAGAA CCTGGAACTG GTGCACCGGC TCGACCGCGA TACATCCGGT
CTATTGATCG TGGCCAAGAA GCGCTCGGCG CTGACCGAGC TGCAGGCCTT GATGCGCGAA
GACGACCGCG TCGAAGGGCG GGGCATCACC AAGCGCTACC TGAGCTTATT AATAGGACGC
ATGCCCGATG GCGTGATGAG CGTGGACGCG CCGCTGCATA TCGGCCTGCG CCAGGGGGGC
GAGCGGCATG TGCAGGTGAA TGCGATTGGC AAGCCGTCGC TGAGCCATTT CACGTTGCTG
GAACGGCGCG GTGGGCATTC GTATTGCGAA GTGCGCATCG AAACCGGTCG CACCCACCAG
ATCCGCGTGC ATGCCCAGCA CCTGGGTCAC CCGGTGGCCG GCGACGACAA ATACGGCGAG
GCGGACGTGA ACAAGCGCCT GCGTGACCAA CTCGGTTTGA AGCGGCTGTT CCTGCATGCC
GCGTCGCTGG AGTTCGCCCT GGATGCCGGC CAGACGCCGT ACGTGCTGAG CGCGCCGCTG
GCGCCCGAAC TGGCCGAAGC GCTGGACCAG CTTGGCCGCT GA
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| Protein sequence | MRMLKVPEDR AGQRLDNFLL GQLKGAPRSL IYKLVRSGQV RVNGGRAKAE RKLEGGEEVR
IPPVRVNEEG DKAAPPSSFM ARLEAAIVFE DARLLALNKP SGVASHGGSG ISFGAIETLR
ALRPNQNLEL VHRLDRDTSG LLIVAKKRSA LTELQALMRE DDRVEGRGIT KRYLSLLIGR
MPDGVMSVDA PLHIGLRQGG ERHVQVNAIG KPSLSHFTLL ERRGGHSYCE VRIETGRTHQ
IRVHAQHLGH PVAGDDKYGE ADVNKRLRDQ LGLKRLFLHA ASLEFALDAG QTPYVLSAPL
APELAEALDQ LGR
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