| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01403 |
|---|
| Symbol | gumM |
|---|
| ID | 6306907 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 3500651 |
|---|
| End bp | 3501442 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642640654 |
|---|
| Product | exopolysaccharide xanthan biosynthesis glycosyltransferase GumM |
|---|
| Protein accession | YP_001914508 |
|---|
| Protein GI | 188577579 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1922] Teichoic acid biosynthesis proteins |
|---|
| TIGRFAM ID | [TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGGCC AGCGCGTTGA TGTTGAGACG ACGGGAATTG CCAGCGGGAA CACGCCGCCC
GGTGTGGTGA TTGCGTTAGG TGGCTTTCCG GTGTTGTCCA CAACCCAGGA AGCCTTCGCG
CTGGATCTAT TCCATGCGTT GGCAGCACGT CAGCCGCGTC GGGTGTTCTT CGCCAATACC
AATTTCATCG TGCAATGCCA AGCGCTGCGC ATGCGTATGC GCGAGCCCAG CGTGCGCATC
GTCAATGACG GGATCGGCAT GGATCTGGCC GCGCGGCTGA TCCACGGCCG CCGCTTCGCC
GGCAACCTCA ATGGCACCGA CCTGATTCCG TATCTGTGTC GTGAGAGTGC GCAGCCGCTC
AAATTCTTCC TGCTGGGCGG TCGTCCTGGC GTCGGCAAGA CCGCTGCAGC CACGCTGACC
GGGACGTTGG GTCAGCAGGT GGTCGGTATG TGCGATGGCT ACGGCGAATT CGCGGCGGCC
GGCGAGGGTC TGACCGAGCG CATCAATCGC TCCGGTGCCG ATGTGTTGCT GGTGGCGTTC
GGCAACCCGC TGCAGGAGCG CTGGATCCTG GATCACAGCC ATGCGCTGGG CGTGCCGCTG
GTCTTCGGCG TGGGCGCGTT GCTCGATTTC TTGTCGGGTA CCGCCAAGCG TGCGCCCGAG
TGGGTGCGGC GCCTGCATCT GGAATGGATG TATCGGCTGC TCAACGAGCC GCGCCGTTTG
CTCAAGCGCT ATAGCTGGGA TCTGCTGGTG TTCTTCCGCG CCTGTTTGCG CGCGGGCAAA
CAGCTGCCCT GA
|
|---|
| Protein sequence | MQGQRVDVET TGIASGNTPP GVVIALGGFP VLSTTQEAFA LDLFHALAAR QPRRVFFANT
NFIVQCQALR MRMREPSVRI VNDGIGMDLA ARLIHGRRFA GNLNGTDLIP YLCRESAQPL
KFFLLGGRPG VGKTAAATLT GTLGQQVVGM CDGYGEFAAA GEGLTERINR SGADVLLVAF
GNPLQERWIL DHSHALGVPL VFGVGALLDF LSGTAKRAPE WVRRLHLEWM YRLLNEPRRL
LKRYSWDLLV FFRACLRAGK QLP
|
|---|
| |