| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01290 |
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| Symbol | nuoD |
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| ID | 6307025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3612909 |
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| End bp | 3614216 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642640772 |
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| Product | NADH dehydrogenase subunit D |
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| Protein accession | YP_001914622 |
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| Protein GI | 188577693 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.191542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTGAGT TCCGCCAGGC AACCGATGCC TTCGCGAGCA ATCCTGCCGA AAGCAAGCAG
GAAATCCGCA ATTACACGAT GAACTTCGGC CCGCAGCATC CTGCGGCGCA CGGCGTGTTG
CGCCTGATCC TGGAAATGGA CGGCGAAACC GTGGTGCGCG CCGATCCGCA TATCGGCCTG
CTGCACCGTG GCACCGAGAA GTTGGCCGAA TCCAAGCCGT TCAACCAGTC GGTTCCGTAC
ATGGATCGCC TGGATTACGT GTCGATGATG TGCAACGAGC ACGCCTACGT GCGCGCGATC
GAATCTCTGA TGGGAATCGA AGCGCCCGAG CGTGCGCAGT ACATCCGCAC CATGTTCGAC
GAGATCACCC GCATCAAGAA CCACCTGATG TGGGTCGGTT CCAACGCGCT CGATCTGGGT
GCAATGGCGG TGATGCTGTA TGCGTTCCGC GAGCGCGAAG AATTGATGGA CGTCTACGAG
GCGGTCAGTG GTGCGCGTAT GCATGCTGCC TACTACCGTC CGGGTGGTGT CTACCGCGAT
CTGCCTGATC GCATGCCCAG GTACAAGGAA TCGCGTTGGC ACAAGGGTGG GGCGCTGAAG
AAGCTCAATG CAGCGCGTGA AGGCTCGATG CTGGATTTCC TTGAGGATTT CACCAACACC
TTCCCGTTGC GCGTGGACGA ATACGAAACG CTGCTGACCG ACAACCGCAT CTGGAAGCAG
CGTACCGTCG ACGTCGGCAT CATTAGCCCG GATCTGGCAC GTGCCTGGGG CATGACCGGT
CCAATGCTGC GTGGTTCGGG CATCGAGTGG GATCTGCGCA AGAAGCAGCC GTATGCCAAG
TACGACGCAG TGGATTTCGA TATCCCGGTC GGCACCAACG GCGACTGCTA CGACCGCTAC
CTGGTGCGCG TGGCCGAGAT GCGCGAGTCC AACCGCATCA TCAAGCAGTG CGTGAAGTGG
CTGAAGGCCA ACCCGGGCCC GGTCATGGTC ACCAATTTCA AGGTCGCTCC GCCCAGCCGC
GAAGGAATGA AGGACGACAT GGAAGCGCTG ATCCATCACT TCAAGCTGTT CAGTGAAGGC
TATTGCGTGC CTGCCGGCGA AACCTACAGC GCGGTCGAAG CGCCGAAGGG CGAGTTCGGT
TGCTACCTGA TGTCCGATGG CGCCAACAAG CCGTTCCGCG TGCATCTGCG CGCGCCGGGT
TTTGCGCATC TGTCGTCGAT GGACGCAGTG GTGCGTGGCT ATCTGCTGGC CGACGTCGTG
GCGATGATCG GCACTTACGA TTTGGTTTTC GGTGAGGTTG ACCGATGA
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| Protein sequence | MSEFRQATDA FASNPAESKQ EIRNYTMNFG PQHPAAHGVL RLILEMDGET VVRADPHIGL
LHRGTEKLAE SKPFNQSVPY MDRLDYVSMM CNEHAYVRAI ESLMGIEAPE RAQYIRTMFD
EITRIKNHLM WVGSNALDLG AMAVMLYAFR EREELMDVYE AVSGARMHAA YYRPGGVYRD
LPDRMPRYKE SRWHKGGALK KLNAAREGSM LDFLEDFTNT FPLRVDEYET LLTDNRIWKQ
RTVDVGIISP DLARAWGMTG PMLRGSGIEW DLRKKQPYAK YDAVDFDIPV GTNGDCYDRY
LVRVAEMRES NRIIKQCVKW LKANPGPVMV TNFKVAPPSR EGMKDDMEAL IHHFKLFSEG
YCVPAGETYS AVEAPKGEFG CYLMSDGANK PFRVHLRAPG FAHLSSMDAV VRGYLLADVV
AMIGTYDLVF GEVDR
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