| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01247 |
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| Symbol | rimO |
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| ID | 6307067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3649023 |
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| End bp | 3650405 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642640814 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_001914663 |
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| Protein GI | 188577734 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATCCAG TGAAGAATCA AGTGCCCAAA GTTGGCTTCG TGTCACTAGG TTGTCCGAAG
GCGCTCGTCG ATTCCGAACG CATCCTCACC CAGCTGCGCG TGGAGGGCTA CGACATCGTG
CCCAGTTACG ACGCTGCCGA CGTGGTGGTG GTCAACACCT GCGGCTTCAT CGATTCGGCA
GTGACCGAGT CGCTGGACGC GATCGGCGAG GCGATGAACG CCAACGGCAA GGTCATCGTC
ACCGGCTGCC TGGGCAAGCG CCCGGAGCAG ATTCGTGAGG CGTACCCGCA GGTGCTGGCG
GTGTCCGGCC CGCAGGACTA CCAGAGCGTG ATGGAGGCGG TGCACGCCGC TTTGCCGCCG
CGTCACGACC CCTTCGTGGA TCTGGTGCCG GACTACGGCA TCAAGCTGAC ACCGCGCCAT
TACGCGTATC TCAAGATTTC CGAAGGCTGC AATCACCGCT GCAGCTTCTG CATCATTCCC
TCGATGCGCG GCGATCTCGT CTCCCGTCCG GTCGATGAGG TGCTGTGCGA AGCCGAGCGG
TTGGTGCGCG GTGGCGTCAA GGAATTGCTG GTGGTGTCGC AGGACACCTC TGCCTACGGC
GTTGACCTGA AGTACGCCGA GCGCCCGTGG CGCGACCGCA TGTACCAGAC CCGCATGAAG
GCGCTGTGCG AGGGCTTGTC GGAGCTGGGC GTATGGACGC GCCTGCATTA CGTGTACCCG
TATCCGCACG TGGACGATGT GCTTCCGCTG ATGGCCGAAG GCAAGCTGCT GCCGTATCTG
GACATCCCGT TCCAGCACGC CAGCCCGCGC ATCCTCAAGT TGATGAAACG TCCCGGTGCA
GTGGAAAAGA CCCTGCAGCG CGTGCAGCGC TGGAAGGCGA TGTGCCCGGA GATCACCGTG
CGTTCGACCT TCATTGTCGG TTTCCCCGGC GAAACCGATG CCGAGTTCGA ATCTTTGCTG
GACTTCCTGG ATCAGGCGCA ACTGGACCGC GTCGGTGCGT TCGCGTACTC GCCGGTCGAT
GGCGCCAGCG CCAATGCACT GCCGGACCCG GTGCCGGAAG AAGTGAAGCA GGAGCGCCTG
GCGCGCTTCA TGGCCAAACA GGCGGAGATT TCTGCGTTGC GGCTTGAGGC AAAGATCGGC
AGCGTGCAGC AGTGCCTTGT TGATCTGATC GAAGACGACA TCGCCGTGGC GCGCTCACGC
GCCGATGCGC CGGAGATCGA TGGCCTGGTG CATATCCAGA ACGGCGGCGA GCTCGGGTTG
AAGGTGGGCG ATCTGGTCGA TGTGGAAATC ACCGACAGCG ACGAGCACGA TCTGTTCGGC
GATGCGCTGC CGGCGAACGT CGTACCCCAG CAAGGGCGCG CGTTGAATCT GCAGATGGTG
TAA
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| Protein sequence | MNPVKNQVPK VGFVSLGCPK ALVDSERILT QLRVEGYDIV PSYDAADVVV VNTCGFIDSA
VTESLDAIGE AMNANGKVIV TGCLGKRPEQ IREAYPQVLA VSGPQDYQSV MEAVHAALPP
RHDPFVDLVP DYGIKLTPRH YAYLKISEGC NHRCSFCIIP SMRGDLVSRP VDEVLCEAER
LVRGGVKELL VVSQDTSAYG VDLKYAERPW RDRMYQTRMK ALCEGLSELG VWTRLHYVYP
YPHVDDVLPL MAEGKLLPYL DIPFQHASPR ILKLMKRPGA VEKTLQRVQR WKAMCPEITV
RSTFIVGFPG ETDAEFESLL DFLDQAQLDR VGAFAYSPVD GASANALPDP VPEEVKQERL
ARFMAKQAEI SALRLEAKIG SVQQCLVDLI EDDIAVARSR ADAPEIDGLV HIQNGGELGL
KVGDLVDVEI TDSDEHDLFG DALPANVVPQ QGRALNLQMV
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