Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01228 |
Symbol | |
ID | 6306381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 2950474 |
End bp | 2951538 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642640137 |
Product | transcriptional regulator |
Protein accession | YP_001913994 |
Protein GI | 188577065 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00348706 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCTTGC GCGATATCGC AGGGGCCATT GGTGTGTCGC GGGCGACGGT GTCGCTGGTG CTGCGCGGTA GCCCGCTGGT GCATGCAAGC ACGCGCGCGT GCGTGGAGGC CGAGCTGGAT CGGCAGAATT ATGTCTACAA CCGTACTGCG GCGAATTTGC GCCAGCGCAC CTCGTCCAGC ATCGCGCTGG TCATCAACGA TTTGTCCAAC CCCTTTTTTG CCGAATTCGC CGCCGGTGTC AACGAGGCAT TGGGCGCGGC CGGTTATGTG ACCCTGCTCG GCAGCACCGG CGAATCGACG CAGCGTCAAC AGGTGGTGCT GACCTCGTTG ATGGAGCACA CGCCGGCGGG CATCATCCTG TCGCCGGCCG AAGGCAGCCA GGCGCAGGCG CTCAGCCAGG TACTCGGCCG CCAACGTAAT GTGGTGCTGT TCAACCGTGA GGTAGAAGGC GCGCAGTGGG ATCTGCTGGC GTTGGACAAT GCGCAGGGCG CGTTTCTGGC GTACACCCAT CTGATCGCGC AAGGGCATCG GCGCATCGTG TTTTTTGGTG GGCATGCTGC ATCCAGTTCA TGTCGCCAGC GTCGCGCAGG CTATGCGCGC GCGATGCAGG AAGCAGGCTT GGACACCCTG TACTTCGAGG CGGCACCCAA TCGCCAGGAA GCTGCACTAT GTGGCGTGCG CTTGCTCAGC AGCGATGCGC AAGCTGCGAC TGCGGCAGTC TGCTACAACG ACAGCGTTGC GCTGGGCTTG ATGGCGGCGT TGGCGAAGCA CGGCATCCTG CCAGGCCGCG ACTTTGCGGT GACCGGCTTC GACGACATCG CCGAAGCAGC GTTGTTCACG CCTGCATTGA CAACCCTGGC CGCACACCCG CGTGCGCGCG GAAGACAGGC CGCGCAACTG GTATTGCAGC GGATCGGTAG CCCCGAGCTC GCCGCGCAGC AATTGACCGC AGCAGTCGCC CTGAAAATTC GCGCAAGCAG CGCCTGCGCG CCCGTAGCTC GCATGTCATC ACCTCCCCCT AGCAGTCCAT TCGCCCATTC CCCCACCAAG GCCTCAGGCC GCTGA
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Protein sequence | MTLRDIAGAI GVSRATVSLV LRGSPLVHAS TRACVEAELD RQNYVYNRTA ANLRQRTSSS IALVINDLSN PFFAEFAAGV NEALGAAGYV TLLGSTGEST QRQQVVLTSL MEHTPAGIIL SPAEGSQAQA LSQVLGRQRN VVLFNREVEG AQWDLLALDN AQGAFLAYTH LIAQGHRRIV FFGGHAASSS CRQRRAGYAR AMQEAGLDTL YFEAAPNRQE AALCGVRLLS SDAQAATAAV CYNDSVALGL MAALAKHGIL PGRDFAVTGF DDIAEAALFT PALTTLAAHP RARGRQAAQL VLQRIGSPEL AAQQLTAAVA LKIRASSACA PVARMSSPPP SSPFAHSPTK ASGR
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