Gene PXO_01194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_01194 
Symbol 
ID6306415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand+ 
Start bp2980577 
End bp2981215 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content66% 
IMG OID642640171 
Productthymidylate synthase 
Protein accessionYP_001914028 
Protein GI188577099 
COG category[S] Function unknown 
COG ID[COG1739] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00257] uncharacterized protein, YigZ family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.43796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCAG CAACCCGCAA CACCGCCTCG CATAGAATGG CGGCGATGCT CGATACCCTC 
GCCGCTGACG CGTACCATAG CCTGGACATC AAGCACAGTC GCTTTCTGGC CCACGCTGCC 
GCCCTGGACA CTCCCACGCA TGCGCTGGAG ATCGTGCAGC GCGCGGCTGT GCCGGATGCC 
ACCCATCACT GCTGGGCCTA TCGGTTCGGG CAGGACTATC GCTCCAGCGA CGACGGCGAG 
CCGAGTGGCA CCGCCGGCCG ACCGATCCTG GCCGCCATTG ACGGCCAGGG CTTCGACCGC 
GTGGTGGTCG TGGTCACGCG CTGGTATGGC GGCATCAAAC TCGGTGCCGG CGGGCTGATG 
CGTGCCTATG GCGGCACTGC AGCCGAATGC TTGCGGCTGG CGACGCGTCA ACCGTTGATC 
GCGTTGTCGC TGGTGCAGGT GCAGTGCCGC TTCGACGATC TGGGCCTGGT GCACGCAGCG 
CTTGCGGCCT TCCATGCCGA CAGGCTGGAT GAACATTTCG ATGCCAACGG TGCTGCGTTG 
CGCGTGCAAC TGCCTGCGGA TCAGCTCGCC GGCTTGAAAA CCCGTCTGTG CGACGCCACT 
GGCAATCGTG TCCATCTTTC AACCCCGGAA GCCGCATGA
 
Protein sequence
MAAATRNTAS HRMAAMLDTL AADAYHSLDI KHSRFLAHAA ALDTPTHALE IVQRAAVPDA 
THHCWAYRFG QDYRSSDDGE PSGTAGRPIL AAIDGQGFDR VVVVVTRWYG GIKLGAGGLM 
RAYGGTAAEC LRLATRQPLI ALSLVQVQCR FDDLGLVHAA LAAFHADRLD EHFDANGAAL 
RVQLPADQLA GLKTRLCDAT GNRVHLSTPE AA