| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01186 |
|---|
| Symbol | dnaJ |
|---|
| ID | 6306423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 2989560 |
|---|
| End bp | 2990690 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642640179 |
|---|
| Product | chaperone protein DnaJ |
|---|
| Protein accession | YP_001914036 |
|---|
| Protein GI | 188577107 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.12513 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAC GCGATTACTA CGAAGTGCTG GGCGTTGCCC GTGGCGCCAG CGACGAGGAG
CTGAAGAAGG CGTACCGGCG CTGTGCCATG AAGCACCACC CGGACCGCAA TCCTGGCGAT
GCGGCTGCCG AAGCGGCGTT CAAGGAATGC AAGGAAGCCT ACGAGGTGCT GTCCGACGGC
AATAAGCGGC GCGCCTACGA CGCGCATGGC CATGCGGCCT TCGAGCACGG CATGGGCGGT
GGTGGCGGTG GGCCGGGTAG CCCGGACATG GGAGATATCT TCGGCGATAT CTTCGGCAAT
ATTTTTGGCG GTGGCGCCGC CGGTCCGCGC GCTGCGCGAC GTGGCGCCGA CGTCGGTTAC
GTACTGGAAC TGGATCTGGA AGAAGCCGTC GCCGGGATCG AGCGACGCAT CGAGATCCCG
ACCCTGATCG AATGCGTGTC CTGCCACGGC AGCGGCTCGG AAGACGGCAA GGTCCAGACC
TGCGGTACCT GCCATGGGCG TGGTCAGGTG CGTATCCAGC GCGGCATCTT CGCCATGCAG
CAGAGCTGCC CGCATTGCGA CGGGCGCGGC ACGTTGATCC AGAATCCGTG CAAGACCTGC
CACGGCGCCG GTCGCGTGGA AGAAAACAAG GTGCTATCGA TCAAGGTGCC GGCGGGTGTG
GATACCGGCG ACCGGATTCG TCTTGCAGGG GAAGGCGAGG CTGGCCCGGC CGGCACCCCG
CCGGGCGATC TGTATGTGGA AGTGCGGGTG CGCGAGCATG CGATCTTCCA GCGTGATGGG
GACGATCTGC ATTGCGAAGT GCCGATCCGC ATTTCCCAGG CGGCCTTGGG CGACACCGTG
CGGGTGGCAA CGCTGGGCGG CGAAGCGGAA ATCCGTATCC CGGCCGAGAC CCAGACTGGC
AAGCTGTTCC GCCTGCGTGG CAAGGGCGTG CGTTCGGTGC GCAGCCGCAG CGAAGGCGAT
CTGTATTGCC GTGTGGTGGT GGAAACGCCG GTCAATCTCA CCGCCGATCA GCGCGAGCTG
CTGCAGCAGT TCGAGGCCAC GTTCACCGGC GAAGATGCCC GCAAGCATTC CCCCAAGTCG
GCTACGTTCA TCGATGGGGT CAAGGGCTTT TGGGATCGGA TGACGTCCTG A
|
|---|
| Protein sequence | MSKRDYYEVL GVARGASDEE LKKAYRRCAM KHHPDRNPGD AAAEAAFKEC KEAYEVLSDG
NKRRAYDAHG HAAFEHGMGG GGGGPGSPDM GDIFGDIFGN IFGGGAAGPR AARRGADVGY
VLELDLEEAV AGIERRIEIP TLIECVSCHG SGSEDGKVQT CGTCHGRGQV RIQRGIFAMQ
QSCPHCDGRG TLIQNPCKTC HGAGRVEENK VLSIKVPAGV DTGDRIRLAG EGEAGPAGTP
PGDLYVEVRV REHAIFQRDG DDLHCEVPIR ISQAALGDTV RVATLGGEAE IRIPAETQTG
KLFRLRGKGV RSVRSRSEGD LYCRVVVETP VNLTADQREL LQQFEATFTG EDARKHSPKS
ATFIDGVKGF WDRMTS
|
|---|
| |