| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01156 |
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| Symbol | |
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| ID | 6306454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3014257 |
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| End bp | 3015375 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642640209 |
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| Product | multidrug resistance efflux pump |
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| Protein accession | YP_001914066 |
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| Protein GI | 188577137 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.461805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCATTG TGGCGATCCT GGCGATCATC GGCCTGGTGG TGTGGTACTT CCTGGTCGGC
CGTTGGCACG AAGACACCGA CGACGCGTAC GTACAGGGCA ACCAGGTGCA GATCACCCCG
ATGGTGGGCG GCACTGTGGT GAGTATCGGC GCCGAAGACG GCATGCGCGT GGAGCGCGGC
CAGTTGCTGG TGCAACTGGA CCCGGCCGAC ACCGAGGGCG CGGTGCAGCA GGCCGAAGCC
AATCTTGCCA AGACCGTGCG TCAGGTGCGC GGTCTGTATC GCAGTGTTGA AGGTGCACAG
GCCGAATTGT CCGCACGCGA GGTCGCGCTG CGCAGTGCGC GCTCAGACTT CGCACGGCGT
AAGGATCTGG CTTCCACCGG CGCGATCTCC AACGAAGAAC TCGCGCATGC CCGCGACGAA
CTGGCCGTGG CCGAAGCGGC CGTGAGCGGC TCGCGCGAGA GCTTTGAGCG TAACCGTGCG
TTGGTGGACG ACAGCGCGGT GGCCAACCAG CCGGACGTGC AGGCCGCCGC CGCGCAGCTG
CGTCAGGCGT ATCTGAATCA TGCGCGCACC GGCGTGGTGG CGCCCGTGTC GGGTTATGTC
GCACGGCGCG CGGCACAAGT TGGCCAGCGT GTGCAGCCGG GCAGCGTGCT GATGCTGGTG
GTGCCGCTGG AGCAGGTGTG GGTGGAAGCC AACTTCAAGG AGACCCAGCT CAAGCACATG
CGTCTGGGCC AGGAAGTGGA ACTGCATTCG GATCTGTACG GCGGCGGCGT GAGCTACACC
GGCCGTATCC AGAGCCTGGG TCTGGGCACC GGCAGCGCGT TCTCGCTGTT GCCTGCGCAG
AACGCCAGCG GTAACTGGAT CAAGATCGTA CAGCGCGTGC CGGTACGCAT TGCAGTGGAT
TCCAAGCAGC TGGCCAGCAA TCCGCTGCGG ATCGGGTTGT CTATGAAGGT CGAAGTCAAG
CTGCACGATC AGCAGGGCAG CGTGTTGCCG ACCAAGCTCG CCAACGCTGC GGTGTTCTCC
ACCGACGTGT ATGCGCAGCA GCTCAAGGCT GCCGACGCCG ACGTCCAACG CATCATCCAG
GACAACCTGC CGTCGCAGGC TGCCAGCAAG GCGGGCTAA
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| Protein sequence | MAIVAILAII GLVVWYFLVG RWHEDTDDAY VQGNQVQITP MVGGTVVSIG AEDGMRVERG
QLLVQLDPAD TEGAVQQAEA NLAKTVRQVR GLYRSVEGAQ AELSAREVAL RSARSDFARR
KDLASTGAIS NEELAHARDE LAVAEAAVSG SRESFERNRA LVDDSAVANQ PDVQAAAAQL
RQAYLNHART GVVAPVSGYV ARRAAQVGQR VQPGSVLMLV VPLEQVWVEA NFKETQLKHM
RLGQEVELHS DLYGGGVSYT GRIQSLGLGT GSAFSLLPAQ NASGNWIKIV QRVPVRIAVD
SKQLASNPLR IGLSMKVEVK LHDQQGSVLP TKLANAAVFS TDVYAQQLKA ADADVQRIIQ
DNLPSQAASK AG
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