| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01155 |
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| Symbol | |
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| ID | 6306455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3015461 |
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| End bp | 3016978 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642640210 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001914067 |
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| Protein GI | 188577138 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.269459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCTG CTAGTTCCCC GACCCAGACG TTGCGCCCGC GCTCGATGCG CTTGGCGCGG
CCGTTCGTTA TCACTGCCCT TGCGCTGGCG CTGGCCGCCT GTGCCAGCAG CCGTGGCCTA
ACCCCGCAGG GTAGCGTGCT GGATCCCAGC AGGCTGCATG CGGAGCGCAC CCTGGCGCAG
CAAACCACGC TGAGCCCGGC CGCGTGGCCG GCCAGCGATT GGTGGCGCGC CCTGGGCGAT
GCGCAGCTGG ACGCGCTGAT TGCCGAGGGC CTGCAGCACA GCCCCAGCCT TGCGGCGGCC
GACGCGCGCT TGCATCGGGT GCAGGCCCGT ATCGACACTG CGCAGGCCAA TCGTGGCCCC
AGCTTGTCGG TGTCCGGTGG CTACACCGGC CTGCAGCTGC CCGAATCCTT GGTCGGCGAA
GAGATCGGTG GCAAATACGG CGGTAGTGCG CAGCTCGCGT TGGAGTTCCG CTACGGCGTC
GATCTGTGGG GCGGCAAGCG CAGCGCGTGG GAAGCGGCGG TCGATCAGGC GCATGCAGCC
GAAGTGGATG CGCAGGCGGC GCGGTTGAAT CTGTCGTCGG CGATTGCCGA AGGCTATGCG
CAGCTTGCTT ACGCATGGAG TTTGCATGAC CTGGCCAATG ACGAATTAGG CCGCGCGCAG
AAGCTGCTGG AATTGACCCG GCAACGCCGC AGCGCCGGCA TCGACAGCGA GTTGCAGGTG
CGTCAGGCGC AGGCGCGCGT GCCGGCTGCG CAGCAGCAGC TGCAGTCCGC GCAGCAGCAG
ATCGACGAAG CCCGCACTGC GCTGGCGGCG TTGGTCGGGC AGGGCCCGGA TCGCGGCTTG
GACATCGCCC GCCCGGTGCT GGGCGGGGGC ATTGCCACCC AGTTGCCGAG CATGCTGCCG
GCCGATCTGC TCGGCCGTCG TCCCGACGTG GTCGCCGCGC GCTGGCGCGT GGAGGCGGCC
GACAAGGACA TCGCGGTCGC CAAGACCCGC TTCTATCCCA GCCTCAACCT CACTGCGCTG
GGCGGTGTGA TCAACCCGGA TGTCGGCAAG TTGCTGGACA GTGGCTCGGT GTTCGGTCTG
GTCGCGCCGG CGCTGAGCCT GCCGATCTTC GACGGCGGCA AGCTGCGCGC CAACCTGGCC
GGCAGCGATG CGCAATACGA CCTGGCCGTG GCCGACTACA ACCAGAAAGT GATCTCTGCG
CTGCGCGAAG TGGCCGACCA GGTCACCGCC GTGCGCTCGC TGCAGCAACG CGCGCAGGCG
CAGAACGACG CCGTGCAGAC CGCCATGGCG GCCTTCGATC TGGCCCAGCA GCGCTACCGC
GCCGGCATCG GCAGCTATCT GGAAGTGCTT CGCGTGCAGG AGCAGGTGCT CGTCGCACGC
CAACGCATGG CTGGGCTGCA GTCTCAACAA CTTCTGGCCT CGGTGAGGTT GCAGCGTGCG
CTGGGCGGCG AATTCACGCC GGAGCCCGCG CGCGATACCG CACACACCGC GCCCACTTCC
GCACAACCGA ATTCCTGA
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| Protein sequence | MNAASSPTQT LRPRSMRLAR PFVITALALA LAACASSRGL TPQGSVLDPS RLHAERTLAQ
QTTLSPAAWP ASDWWRALGD AQLDALIAEG LQHSPSLAAA DARLHRVQAR IDTAQANRGP
SLSVSGGYTG LQLPESLVGE EIGGKYGGSA QLALEFRYGV DLWGGKRSAW EAAVDQAHAA
EVDAQAARLN LSSAIAEGYA QLAYAWSLHD LANDELGRAQ KLLELTRQRR SAGIDSELQV
RQAQARVPAA QQQLQSAQQQ IDEARTALAA LVGQGPDRGL DIARPVLGGG IATQLPSMLP
ADLLGRRPDV VAARWRVEAA DKDIAVAKTR FYPSLNLTAL GGVINPDVGK LLDSGSVFGL
VAPALSLPIF DGGKLRANLA GSDAQYDLAV ADYNQKVISA LREVADQVTA VRSLQQRAQA
QNDAVQTAMA AFDLAQQRYR AGIGSYLEVL RVQEQVLVAR QRMAGLQSQQ LLASVRLQRA
LGGEFTPEPA RDTAHTAPTS AQPNS
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