| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01122 |
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| Symbol | |
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| ID | 6306488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 3051507 |
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| End bp | 3052853 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642640242 |
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| Product | membrane-associated Zn-dependent protease |
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| Protein accession | YP_001914099 |
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| Protein GI | 188577170 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.496446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGACT TCATCGGTTC GGTCTGGTGG ATGATCGTCA GCCTGGGCGT GTTGGTGACC
TTCCATGAGT TCGGGCATTT CTGGGTCGCG CGACGCTGCG GGGTCAAGGT GCTGCGTTTT
TCGCTGGGCT TCGGCAAACC GTTGTGGATG CGCCGCGACC GCCATGGCAC CGAGTTCGTA
GTGGCCGCGA TCCCGCTAGG CGGCTACGTC AAGATGCTCG ACGAGCGCGA AGGCGAGGTG
CCTCCGGTGG AGCTGGACCA GGCCTTCAAT CGCAAGACCG TGTGGCAACG CATCGCGATC
GTGGCGGCCG GTCCCATCGC CAACCTGTTG CTGTGCATGA CGATGCTGTG GGCGATGTTT
GTGGTGGGCA AGCAGGATTA TTCGGCCACC GTCGGCCGCG CCGATGGGCT GGCGGCCGAA
GCCGGGCTCG CCCCGGGCGA GCGCATCGTG CGCATCGACG GCCGCAGCGT CAGCAGCTGG
AGCGATGCCA ACATGCAGCT CACCACCGCG GCAATGGACA AGCGCGATGT CCGCGTCCTG
ACCGCCTCCG ACGCTGCGAG CAGCAGCGAA CATACCTTGC GCCTGTCGCA GTTGCCGGTC
GGCTTCGACG AACGCCGGGT GGCGTCGCTG GCCGGCATCG GCTGGCAGTT CATGTTGCAG
CCACCGGTGA TTGCCGCAGT GGTGAAGGGT TCGGTGGCCG ACGGCCTGCT CAAGCCGGGC
GACCGCATCG TGGCCATCGA CGGCCAGCCG ATCCGCTCGG CAGAAGACAT CATTCCGCAG
GTGCAGGCGC TGGGTGCGCA CGGCGGCCCG GGCATGATCG AGGTGGCACG CGGTGAAGAC
CGTCTGGCCC TGGAAATCGC CCCGCGCAAA TCGACGCAAG GCCAGTGGAT GATCGGCGTG
CGCCCGGCCG CCGCGCCGGC CCCGGAATAC GACAGCCGTC AGCAATACGG GCTGCTCGCC
GCCGTGCCGG CTGCGATCCG CGAAACCGGC CGAATGACGG CCGATTCGCT GGGCATGATG
AAGCGCATGC TCACCGGCCA GGCCTCGGTC AAGAGCATCT CCGGCCCGGT CACCATTGCG
CGCGCGGCCA ACGCCTCGGC CGAACGCGGG CTCGACTGGT TCCTGTATTT CCTGGGGTTG
CTGTCGCTCA GCCTGGCGAT CTTCAACCTG ATGCCCATCC CGATCTTGGA CGGGGGGCAT
CTGCTGTATT ACCTTATCGA GTTGATCAAG GGCAGCCCGA TCAGCGAACG GGCCATGATT
GCCGGACAAT ACGTCGGCCT GGCGGTCCTG GCCGGGTTGA TGGGACTGGC GTTCTACAAC
GACATCCTCG GTCTGGTTCC ACGATGA
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| Protein sequence | MGDFIGSVWW MIVSLGVLVT FHEFGHFWVA RRCGVKVLRF SLGFGKPLWM RRDRHGTEFV
VAAIPLGGYV KMLDEREGEV PPVELDQAFN RKTVWQRIAI VAAGPIANLL LCMTMLWAMF
VVGKQDYSAT VGRADGLAAE AGLAPGERIV RIDGRSVSSW SDANMQLTTA AMDKRDVRVL
TASDAASSSE HTLRLSQLPV GFDERRVASL AGIGWQFMLQ PPVIAAVVKG SVADGLLKPG
DRIVAIDGQP IRSAEDIIPQ VQALGAHGGP GMIEVARGED RLALEIAPRK STQGQWMIGV
RPAAAPAPEY DSRQQYGLLA AVPAAIRETG RMTADSLGMM KRMLTGQASV KSISGPVTIA
RAANASAERG LDWFLYFLGL LSLSLAIFNL MPIPILDGGH LLYYLIELIK GSPISERAMI
AGQYVGLAVL AGLMGLAFYN DILGLVPR
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