Gene PXO_01115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_01115 
SymbolrnhB 
ID6306495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand+ 
Start bp3060238 
End bp3060873 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content68% 
IMG OID642640249 
Productribonuclease HII 
Protein accessionYP_001914106 
Protein GI188577177 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0002331 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTCGCCG GCGTCGATGA AGCGGGCCGC GGGCCGCTCG CTGGCCCCGT CGCCGTCGCC 
GCCGTGGTGT TCGACCCGAA CAAGCCGCGC ATCAATGGGC TGGACGATTC CAAGCAGCTT 
ACCGCCGAGC GGCGCGAGCA GTTGTATGCG CGCATCGTCG ATCGGGCGCT GTCGTGGTCG 
GTGGTGTTGA TCGACAGCGA GGAGATCGAC CGCATCAATA TCTACCAGGC CACCATGCTC 
GGCATGCGGC GCGCGGTGGA AGGCGTGGCG CATGTGGCCG GATTCGCGCG CATCGATGGC 
AACCGCGTGC CCAAGGGGCT GCCCTGCCCG GCCGAGGCGC TGATCGGCGG CGACGCGCTG 
GACCGCGCCA TCATGGCCGC CTCGATCGTG GCCAAGGTCA CCCGCGACCG GCTGATGCAC 
GAACTGCACG CGCAACATCC AGAGTATCGC TTCGACCAGC ACAAGGGCTA CAGCACGCCG 
ATGCACCTGG CTGCATTGCA GACCCACGGG CCATGCCCGC AGCATCGACG CAGTTTTGCG 
CCGGTCCGCT TGGCGCTGGA AGGCCGTGAG CAGGGATCGG CCGCGATCGG CGACCCAGAG 
CAGTTGCAGG TCGCGCAGCT GGTTGCGCCG CTGTAA
 
Protein sequence
MVAGVDEAGR GPLAGPVAVA AVVFDPNKPR INGLDDSKQL TAERREQLYA RIVDRALSWS 
VVLIDSEEID RINIYQATML GMRRAVEGVA HVAGFARIDG NRVPKGLPCP AEALIGGDAL 
DRAIMAASIV AKVTRDRLMH ELHAQHPEYR FDQHKGYSTP MHLAALQTHG PCPQHRRSFA 
PVRLALEGRE QGSAAIGDPE QLQVAQLVAP L