Gene PXO_01050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_01050 
Symbol 
ID6306025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp2551550 
End bp2553922 
Gene Length2373 bp 
Protein Length790 aa 
Translation table11 
GC content65% 
IMG OID642639788 
Product3-hydroxyacyl-CoA dehydrogenase 
Protein accessionYP_001913648 
Protein GI188576719 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.175715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAATC CGTTGCTAGT TCGTCGCGCC GCCGTGCTCG GTGCCGGCGT CATGGGCGCG 
CAGATCGCCG CCCACCTCAC CAATGCCGGT GTCGACACCG TGCTGTTCGA CCTGCCCGCC
AAGGAAGGCC CGGCCGACGG CATCGTGCTC AAGGCGATTG CCAATCTCGG CAAGCTGAGC
CCTGCACCGC TCGCCAGCAA GGCGCTGGCC GAGGCGATCA CGCCGGCCAA CTACGAGAGC
GGCCTGGAAC AACTGCGCCA TTGCGATCTG ATCATCGAAG CGATCGCCGA GCGCATGGAT
TGGAAGCAGG ACCTGTACAA GAAGATCGCC CCGTTCGTCT CCGCGCATGC CGTGCTGGCG
TCCAATACCT CGGGCCTGGG CATCAACAAG CTCGCCGACG TGCTGCCGGA GCAGCTGCGC
CATCGCTTCT GCGGCGTGCA TTTCTTCAAT CCGCCGCGCT ACATGCACCT GGCCGAGTTG
ATCCCGGCCA AGGGCACCGA CAAAGCCGTG CTCGAAGGCC TGGAAGCGTT CCTGGTCACC
ACGCTCGGCA AGGGTGTTGT GTATGCCAAG GACACGCCGA ATTTCATCGG CAACCGCATC
GGCGTGTTCT CGATCCTGTC CACCATCCAC CACACGCAGC AATTCGGCCT GGGCTTCGAT
GAGGTCGATG CGCTGACCGG CCCGCTGGTC GGTCGCCCGA AGTCGGCAAC CTACCGCACC
TCGGACGTGG TCGGCCTGGA CACCATGGCG CACGTGATCA AGACCATGGG CGACACCCTG
CCGGACGACC CGTGGCACCA GTATTTCACC TCGCCCAAGT GGCTGGATGC GCTGATCGCC
AAAGGTGCGC TGGGCCAGAA GGTCGGCGCC GGCATCTTCC GCAAGGTCGG CAAGGATATC
GTGGTGGTCG ATCTGGAGAA GCAGGACTAC CGCCCGGCAG ATCGCGTCGC TGCGCCGGAA
GTGGTGGATA TCCTCAAGAT CAAGAACCCG GCCGAAAAGT TCGCCACGCT GCGCGAGAGC
GAGCACCCGC AGGCGCAGTT CCTGTGGGCC ACGTTCCGCG ACCTGTTCCA CTACAGCGCC
GTCCATCTGG CCGATATCGC CGAAACCGCG CGCGATGTGG ATCTGGCGAC CCGCTGGGGC
TACGGCTGGT CGCTGGGCCC GTTCGAAACC TGGCAGGCCG CCGGCTGGAA GCAGGTGGCG
CAGTGGATTG CCGAAGACAT TTCCAATGGC AAGAGCATGA GCAGCGCGCC GCTGCCGAAC
TGGGTGTTCG ATGGTCGCGA CGGCGTGCAT GGCGCCGAAG GCTCGTACAG CCCGGCGCGC
GATGCCAAGC TGCCGCGTTC GGCATTGCCG GTGTACACGC GTCAGCGCTT CCCCGATCCG
TTGCTGGGCG AGCAGTTCTC GCCCGGCGAA ACCGTGTTCG AAAACGACGG CGTGCGCATG
TGGCATGACG GCGACGACAT CGCGGTGGTC AGCTTCAAGA CCAAGATGAA CACCGTCTCC
GACCACGTGC TCAACGGCTT GCAGGACGTC GTTGGTCGCG CCGAGAAGGA CTTCGCTGGT
CTGGTGATCT GGCAGCAGAA AGAGCCCTTC TCCGCCGGTG CCGATCTGAC CGGCGCGCTT
GGCCTGCTGC AGGCCGGCAA GGTCGATGCG TTCGAAGCGC TGGTCGCCAA CTTCCAGGCC
ACCAGCCAGC GCATCAAGTA CGCACAGGTG CCGGTGATTT CGGCCGTGCG CGGTCTGGCA
CTGGGCGGCG GTTGCGAATT CCAGATGCAC AGCGCCAAGA CCGTCGCCTC GCTGGAAAGC
TACATCGGCC TGGTCGAAGC CGGCGTCGGC TTGCTGCCGG CTGGCGGCGG CTTGAAGGAG
ATCGCGGTGC GTGCGTCGAT TGCCGCAGGT CCGGGCGGCG ATGTGTTCGC CGAGTTGAAG
AAGACCTTCG AAACCGTGGC AATGGCCAAG GTCTCCAACT CGGCGGTCAA CGCCCAGGAA
CTTGGCCTGC TGCGTGCCAC CGACAAGGTC GTGTTCAACA GCTTTGAGGC GCTGCACATC
GCCAAGGCCG AGGCACGCGC ATTGGCCGAG GGCGGCTACC GCGCCCCGCT GCCGGCACGC
CGCATCCAGG TCGCCGGCGA CGTCGGCATC GCCACCTTCA AGATGCTGCT GGTCAACATG
CTGGAAGGCC GCTTCATCAG CGAATACGAC TACGAGATCG CCACCCGCAT CGCCACGGTG
GTCTGCGGCG GCGAAGTGGA TCGCGGCGCG CTGGTGGACG AAGAATGGCT GCTCAAGCTG
GAGCGCAAGC ACTTTGTCGA ACTGGCCCAG CAGGAAAAAA CCCAGGCGCG GATTGGGCAC
ATGCTCAAGA CGGGGAAGCC GTTGAGGAAC TGA
 
Protein sequence
MSNPLLVRRA AVLGAGVMGA QIAAHLTNAG VDTVLFDLPA KEGPADGIVL KAIANLGKLS 
PAPLASKALA EAITPANYES GLEQLRHCDL IIEAIAERMD WKQDLYKKIA PFVSAHAVLA
SNTSGLGINK LADVLPEQLR HRFCGVHFFN PPRYMHLAEL IPAKGTDKAV LEGLEAFLVT
TLGKGVVYAK DTPNFIGNRI GVFSILSTIH HTQQFGLGFD EVDALTGPLV GRPKSATYRT
SDVVGLDTMA HVIKTMGDTL PDDPWHQYFT SPKWLDALIA KGALGQKVGA GIFRKVGKDI
VVVDLEKQDY RPADRVAAPE VVDILKIKNP AEKFATLRES EHPQAQFLWA TFRDLFHYSA
VHLADIAETA RDVDLATRWG YGWSLGPFET WQAAGWKQVA QWIAEDISNG KSMSSAPLPN
WVFDGRDGVH GAEGSYSPAR DAKLPRSALP VYTRQRFPDP LLGEQFSPGE TVFENDGVRM
WHDGDDIAVV SFKTKMNTVS DHVLNGLQDV VGRAEKDFAG LVIWQQKEPF SAGADLTGAL
GLLQAGKVDA FEALVANFQA TSQRIKYAQV PVISAVRGLA LGGGCEFQMH SAKTVASLES
YIGLVEAGVG LLPAGGGLKE IAVRASIAAG PGGDVFAELK KTFETVAMAK VSNSAVNAQE
LGLLRATDKV VFNSFEALHI AKAEARALAE GGYRAPLPAR RIQVAGDVGI ATFKMLLVNM
LEGRFISEYD YEIATRIATV VCGGEVDRGA LVDEEWLLKL ERKHFVELAQ QEKTQARIGH
MLKTGKPLRN