Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01050 |
Symbol | |
ID | 6306025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 2551550 |
End bp | 2553922 |
Gene Length | 2373 bp |
Protein Length | 790 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642639788 |
Product | 3-hydroxyacyl-CoA dehydrogenase |
Protein accession | YP_001913648 |
Protein GI | 188576719 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.175715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAATC CGTTGCTAGT TCGTCGCGCC GCCGTGCTCG GTGCCGGCGT CATGGGCGCG CAGATCGCCG CCCACCTCAC CAATGCCGGT GTCGACACCG TGCTGTTCGA CCTGCCCGCC AAGGAAGGCC CGGCCGACGG CATCGTGCTC AAGGCGATTG CCAATCTCGG CAAGCTGAGC CCTGCACCGC TCGCCAGCAA GGCGCTGGCC GAGGCGATCA CGCCGGCCAA CTACGAGAGC GGCCTGGAAC AACTGCGCCA TTGCGATCTG ATCATCGAAG CGATCGCCGA GCGCATGGAT TGGAAGCAGG ACCTGTACAA GAAGATCGCC CCGTTCGTCT CCGCGCATGC CGTGCTGGCG TCCAATACCT CGGGCCTGGG CATCAACAAG CTCGCCGACG TGCTGCCGGA GCAGCTGCGC CATCGCTTCT GCGGCGTGCA TTTCTTCAAT CCGCCGCGCT ACATGCACCT GGCCGAGTTG ATCCCGGCCA AGGGCACCGA CAAAGCCGTG CTCGAAGGCC TGGAAGCGTT CCTGGTCACC ACGCTCGGCA AGGGTGTTGT GTATGCCAAG GACACGCCGA ATTTCATCGG CAACCGCATC GGCGTGTTCT CGATCCTGTC CACCATCCAC CACACGCAGC AATTCGGCCT GGGCTTCGAT GAGGTCGATG CGCTGACCGG CCCGCTGGTC GGTCGCCCGA AGTCGGCAAC CTACCGCACC TCGGACGTGG TCGGCCTGGA CACCATGGCG CACGTGATCA AGACCATGGG CGACACCCTG CCGGACGACC CGTGGCACCA GTATTTCACC TCGCCCAAGT GGCTGGATGC GCTGATCGCC AAAGGTGCGC TGGGCCAGAA GGTCGGCGCC GGCATCTTCC GCAAGGTCGG CAAGGATATC GTGGTGGTCG ATCTGGAGAA GCAGGACTAC CGCCCGGCAG ATCGCGTCGC TGCGCCGGAA GTGGTGGATA TCCTCAAGAT CAAGAACCCG GCCGAAAAGT TCGCCACGCT GCGCGAGAGC GAGCACCCGC AGGCGCAGTT CCTGTGGGCC ACGTTCCGCG ACCTGTTCCA CTACAGCGCC GTCCATCTGG CCGATATCGC CGAAACCGCG CGCGATGTGG ATCTGGCGAC CCGCTGGGGC TACGGCTGGT CGCTGGGCCC GTTCGAAACC TGGCAGGCCG CCGGCTGGAA GCAGGTGGCG CAGTGGATTG CCGAAGACAT TTCCAATGGC AAGAGCATGA GCAGCGCGCC GCTGCCGAAC TGGGTGTTCG ATGGTCGCGA CGGCGTGCAT GGCGCCGAAG GCTCGTACAG CCCGGCGCGC GATGCCAAGC TGCCGCGTTC GGCATTGCCG GTGTACACGC GTCAGCGCTT CCCCGATCCG TTGCTGGGCG AGCAGTTCTC GCCCGGCGAA ACCGTGTTCG AAAACGACGG CGTGCGCATG TGGCATGACG GCGACGACAT CGCGGTGGTC AGCTTCAAGA CCAAGATGAA CACCGTCTCC GACCACGTGC TCAACGGCTT GCAGGACGTC GTTGGTCGCG CCGAGAAGGA CTTCGCTGGT CTGGTGATCT GGCAGCAGAA AGAGCCCTTC TCCGCCGGTG CCGATCTGAC CGGCGCGCTT GGCCTGCTGC AGGCCGGCAA GGTCGATGCG TTCGAAGCGC TGGTCGCCAA CTTCCAGGCC ACCAGCCAGC GCATCAAGTA CGCACAGGTG CCGGTGATTT CGGCCGTGCG CGGTCTGGCA CTGGGCGGCG GTTGCGAATT CCAGATGCAC AGCGCCAAGA CCGTCGCCTC GCTGGAAAGC TACATCGGCC TGGTCGAAGC CGGCGTCGGC TTGCTGCCGG CTGGCGGCGG CTTGAAGGAG ATCGCGGTGC GTGCGTCGAT TGCCGCAGGT CCGGGCGGCG ATGTGTTCGC CGAGTTGAAG AAGACCTTCG AAACCGTGGC AATGGCCAAG GTCTCCAACT CGGCGGTCAA CGCCCAGGAA CTTGGCCTGC TGCGTGCCAC CGACAAGGTC GTGTTCAACA GCTTTGAGGC GCTGCACATC GCCAAGGCCG AGGCACGCGC ATTGGCCGAG GGCGGCTACC GCGCCCCGCT GCCGGCACGC CGCATCCAGG TCGCCGGCGA CGTCGGCATC GCCACCTTCA AGATGCTGCT GGTCAACATG CTGGAAGGCC GCTTCATCAG CGAATACGAC TACGAGATCG CCACCCGCAT CGCCACGGTG GTCTGCGGCG GCGAAGTGGA TCGCGGCGCG CTGGTGGACG AAGAATGGCT GCTCAAGCTG GAGCGCAAGC ACTTTGTCGA ACTGGCCCAG CAGGAAAAAA CCCAGGCGCG GATTGGGCAC ATGCTCAAGA CGGGGAAGCC GTTGAGGAAC TGA
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Protein sequence | MSNPLLVRRA AVLGAGVMGA QIAAHLTNAG VDTVLFDLPA KEGPADGIVL KAIANLGKLS PAPLASKALA EAITPANYES GLEQLRHCDL IIEAIAERMD WKQDLYKKIA PFVSAHAVLA SNTSGLGINK LADVLPEQLR HRFCGVHFFN PPRYMHLAEL IPAKGTDKAV LEGLEAFLVT TLGKGVVYAK DTPNFIGNRI GVFSILSTIH HTQQFGLGFD EVDALTGPLV GRPKSATYRT SDVVGLDTMA HVIKTMGDTL PDDPWHQYFT SPKWLDALIA KGALGQKVGA GIFRKVGKDI VVVDLEKQDY RPADRVAAPE VVDILKIKNP AEKFATLRES EHPQAQFLWA TFRDLFHYSA VHLADIAETA RDVDLATRWG YGWSLGPFET WQAAGWKQVA QWIAEDISNG KSMSSAPLPN WVFDGRDGVH GAEGSYSPAR DAKLPRSALP VYTRQRFPDP LLGEQFSPGE TVFENDGVRM WHDGDDIAVV SFKTKMNTVS DHVLNGLQDV VGRAEKDFAG LVIWQQKEPF SAGADLTGAL GLLQAGKVDA FEALVANFQA TSQRIKYAQV PVISAVRGLA LGGGCEFQMH SAKTVASLES YIGLVEAGVG LLPAGGGLKE IAVRASIAAG PGGDVFAELK KTFETVAMAK VSNSAVNAQE LGLLRATDKV VFNSFEALHI AKAEARALAE GGYRAPLPAR RIQVAGDVGI ATFKMLLVNM LEGRFISEYD YEIATRIATV VCGGEVDRGA LVDEEWLLKL ERKHFVELAQ QEKTQARIGH MLKTGKPLRN
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