Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00983 |
Symbol | |
ID | 6306088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 2622065 |
End bp | 2625562 |
Gene Length | 3498 bp |
Protein Length | 1165 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642639851 |
Product | O-antigen biosynthesis protein |
Protein accession | YP_001913711 |
Protein GI | 188576782 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGCCT ACAAGCTGCG CTATCTCGAT GAGGCGCTTA CGAGCGTAGT TCTGCAGTCT TACCCCAGGC TCGAGCTGAT CGTCTGCGAC GACAGTGCCG ATGCCTTGAT CGAACAGCGC GTCGCAAGGC ATTCGCTGCA ATGCCGTTTT CCGATCCGCT ATTTCCGCAA TCCAGCTCGC CTGGGCGAGC TCGGCAGCAA AATCAAAGGG ATCACCCTGG CACAGGGCGA GTACGTCAAG TTCCTGCACG ATGACGATGT GCTGCAGCCC GATTGCATTG CGCAGCTGGT GGAAGCGATC GAGCGTAATC CGGGCACGGC GATGGCCTCC TCGCGGCGGA TACGCATCGA TGACGACGGG CAGCCGTTGC CGGACATCCT GGCCACATGC TTCCCATTCG CCGACGACGT GCTGATCGAC GGGCCGGAGC TGGTGTCGTT TCTGGCCGAC CACACCATCA ATTTCATCGG TGAGCCGAGT TGCGTGCTGG CACGACGCGC GGATCTGTTG GCGTTGGGCA ACGCGTTGAT GGCGTTGAAT GGCAAGGCCA TCCACTGGGT CGGCGATCTG GCGATCTACG TCAAGCTGCT GCGCCACGGC AACCTGGCGA TGCTGGCCAG CCCGCTGACC CAGTTCCGTG TCTCGAGTGC GCAGTTCAGT CAGAGTGGTC GCGATCAGCC CGGCATCGGC GATCAGGGCC ATGAAGACTT GCGCCAGGGC ATCCGGCAGC TCGGTTGGCG ACGCGAGACT GGCGACAACC GACTGGTGCG GGTGGCACCG CTCAGTCCGC ACAAGGCACG CGTGTTCAAG CCGGTGGATC TGGTCAATGC GTTGATGCAA AGCGCGGGTA TGGCCGAGCG CGTGTCGCCG GCTACCTGGT TGGGTGTGCG TCATCCGAAC ACAGTGCAGC GTGCGTTGAT CGAAGCGCGC CTGCAGGCGC ATGCCGGTGG CCCGCGCATT GCGGTATTGC TGATCGACCG TCACGGCGAT GCCGCGGGGG TGGCAGCAAC GCGGGCCAGC CTGGATGCGG TGGCCTGCTA TCAACACCAT CACACCTGGG TCATCAGCAG CTCGCCGCAG CAGGTTGCCG AATCCGGTGA GCGCGGCGTG CTGATCGACG AACAAGACTT GGCGGCAACA CTCAACCGAG TGATCACCTC ACAGGACGCG ATCGATTGGG TGCTGCTGGT CGATGCCGGC AGCCTGTTCA CCGCCAGCGG TTTGCTGATG CTGGCACTGG AAATGCTCGC GCTACCGGAC GACTGCCAGG CTATCTACGC CGATGAAGTG ATGGCGCTGG ACAACGGCCA GCTGGGGCTG GCGCTGCGGC CGGCGCTGTA TCTGGACATG CTGTTGAGCG CACCTGCGAC GTTGTCGCGG CACTGGGTGT TCCGGCAGCG CACGCTGCTG GTCGATGGCG GCTTCCCCAC CGGGCCCAGC GCGGCATTCG AACTGGATTA CCAGCTGTGC CTGGTCGAGC GTTACGGGCT GGCCTGCATT CGACATATCG CTGAGCCATT GCTGATTGCA TCGGCCACGC CGCAGCATGC CGACGAAGAC GAGCGGCAGG CGATTGCGCG TCATCTCGCC GAACGCGGCT ACGTGGACGC CGCGGTGCAC AGCACCGGGC CCGGCCGGCA CGCGGTGGAC TACCGCCATG CGCAGCAGCC GCTGGTGAGC ATTCTGGTGC TGGTCGATGG CCGCTTGCCG CAGGTGCAGC GCTGCCTCGA AAGCATTCTC GCCAACACCG CTTACCCGCA TTACGAGGTG CTCCTGCTGG ATCGTGGCAC CACTGCGCCA GACCTGCGCG ACTGGCTGAC CGGCATCGAT ACCCTCGGCA TGCAGCAGAT CCGCGTGCTG CGCTTTGCCG GCGAACCGTC GCGCGAAGCG GTGTGCAATG CCGCCGCCGA ACACGCGCGT GGGGACATGT TGTTGTGGCT GGCGGCAGGC GCCGCGGTGA TGAAGGCCGA TTGGCTGGAG CAGTTGCTCA ACCATGCGCT GCGCCCGGAG GTCGGTGCGG TAGCCGGCAA GTTGCTGCGC GGCGATGGCA CGGTGCACCA CGCCGGCCTG CTGCTGGGCC TGGGGGCACC GGCAACGCGC GCGTTCGAAG GCGCGGCATT CGACGAATCG GGTTATCTGC AGCGCCTGCA ACTGGATCAA AACTACAGCG CGTTGAGCGG CGAATGCCTG ATGTTGCCGC GTCAGCTGTT TATGGACGCC GGTGGCTTCG AACTGGAGCC GGCGCTGGCG CAGTGGAGCG ATGTCGATCT GTGCCTGCGC TTGCAGCAAG CGGGCTACCT CAATGTCTTC GCAGCGCATG CGCAGTTGTT GATCGACCCG CTCGAGGCAA CACCCGTCAC CGCGCTGGAC GAAGACGCGA TGTACGCGCG GTGGCTGCCG GTGATGGCCA ACGACCCTGC CTACAACCCG GGCTTTTCGT TGGACCCGGG CGCCGGCTTC GCGTTGGCCG ACCCACGCGC GAGCTGGCGT CCATTGCAGT CATGGCGGCC GCTGCCGAGC GTGATCGCGT TGCCGGCCGA TATCGAAGGC TGCGGCCACT ACCGGGTGAT CCAGCCGCTA CGCGCCCTTC GGGAAGCTGG ACTCGCCGAA GGAGTGCTGT TCAACGGCTA CCTGGAGATC AGCGAACTGG CGCGTCAGGA TCCCGATGTG GTGATCCTGC AGCGCCAGGT CGGCGAGGCG CGACTGGAGG CGATGCGGCG GATGAAGGCG CTGTCGCGCG CGTTCAAGGT GTACGAGCTG GACGATTACC TGCCCAATTT GCCGTTGAAG AATGCGCACC GCGAGCACAT GCCCAAGGAC ATTCTCAAAA CGGTGCGGCG TGGTCTTAGC ATGGTGGACC GTTTTGTCGT GTCCACTCCG GCGCTGGCCG AGGCGTTCGC CGGGTTGCAC AGCGATATCC GGGTGGCCGA AAACCGCTTG CCGCCCCATT GGTGGGACCA GTTGCCGGCG AGAGGCGAGC GCCAGTGTGG CAAGCCGCGG ATTGGTTGGG CCGGCGGGGC CAGCCATACC GGCGATCTGG AACTGATCGC CGACGTGGTG CGCGAGCTGG CCGATGAAGT TGAGTGGGTG TTCATGGGGA TGTACCCGTT CGCGCTGCGC CAGCACATCC ACCACTTTCA GCCAGGCGTG CTGATCGATC ACTACCCGGC GGCGCTGGCG GCGTTGGATC TGGACCTGGC GCTCGCACCG GTGGAGCAAA ACCTGTTCAA CGAGTGCAAG AGCAACTTGC GCCTGCTCGA ATACGGTGCC TGCGGTTATC CGGTCATCGC CAGCGACGTG CGCTGCTACC AGGGCACCCT GCCGGTGACG TTGGTGAAGA ACCGCTACCG CGACTGGATC GGGGCCATCC GCGAGCACTT GGCCGACCTG GATGCGACCC GCGCCAAGGG CGCCGCCCTG CGCGAGGTGG TGCGGCGCGA CTGGATGCTC AGCGGCAGCA ATCTGGAGCG CTGGCGGGAG GCGTGGTTGC CGGACTGA
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Protein sequence | MPAYKLRYLD EALTSVVLQS YPRLELIVCD DSADALIEQR VARHSLQCRF PIRYFRNPAR LGELGSKIKG ITLAQGEYVK FLHDDDVLQP DCIAQLVEAI ERNPGTAMAS SRRIRIDDDG QPLPDILATC FPFADDVLID GPELVSFLAD HTINFIGEPS CVLARRADLL ALGNALMALN GKAIHWVGDL AIYVKLLRHG NLAMLASPLT QFRVSSAQFS QSGRDQPGIG DQGHEDLRQG IRQLGWRRET GDNRLVRVAP LSPHKARVFK PVDLVNALMQ SAGMAERVSP ATWLGVRHPN TVQRALIEAR LQAHAGGPRI AVLLIDRHGD AAGVAATRAS LDAVACYQHH HTWVISSSPQ QVAESGERGV LIDEQDLAAT LNRVITSQDA IDWVLLVDAG SLFTASGLLM LALEMLALPD DCQAIYADEV MALDNGQLGL ALRPALYLDM LLSAPATLSR HWVFRQRTLL VDGGFPTGPS AAFELDYQLC LVERYGLACI RHIAEPLLIA SATPQHADED ERQAIARHLA ERGYVDAAVH STGPGRHAVD YRHAQQPLVS ILVLVDGRLP QVQRCLESIL ANTAYPHYEV LLLDRGTTAP DLRDWLTGID TLGMQQIRVL RFAGEPSREA VCNAAAEHAR GDMLLWLAAG AAVMKADWLE QLLNHALRPE VGAVAGKLLR GDGTVHHAGL LLGLGAPATR AFEGAAFDES GYLQRLQLDQ NYSALSGECL MLPRQLFMDA GGFELEPALA QWSDVDLCLR LQQAGYLNVF AAHAQLLIDP LEATPVTALD EDAMYARWLP VMANDPAYNP GFSLDPGAGF ALADPRASWR PLQSWRPLPS VIALPADIEG CGHYRVIQPL RALREAGLAE GVLFNGYLEI SELARQDPDV VILQRQVGEA RLEAMRRMKA LSRAFKVYEL DDYLPNLPLK NAHREHMPKD ILKTVRRGLS MVDRFVVSTP ALAEAFAGLH SDIRVAENRL PPHWWDQLPA RGERQCGKPR IGWAGGASHT GDLELIADVV RELADEVEWV FMGMYPFALR QHIHHFQPGV LIDHYPAALA ALDLDLALAP VEQNLFNECK SNLRLLEYGA CGYPVIASDV RCYQGTLPVT LVKNRYRDWI GAIREHLADL DATRAKGAAL REVVRRDWML SGSNLERWRE AWLPD
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