Gene PXO_00964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_00964 
Symbol 
ID6306107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp2644732 
End bp2646822 
Gene Length2091 bp 
Protein Length696 aa 
Translation table11 
GC content66% 
IMG OID642639870 
ProductPutative signal protein with GGDEF and EAL domains 
Protein accessionYP_001913730 
Protein GI188576801 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0651645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCGGAA CCTACAACCT TGGCATGGTG ATGCTGTCAC TGGTGGTGGC CGTGTTGGCC 
TTCTATACCG CGCTGCCGCT AGTCGCATGG ATGACTGCCA GCCGTGTCGG CTTCGCAGCC
GCGTGGCTGT CCGGCGGCGC CATTGCCATG GGTATTGGCA TCTGGTCGAT GCACTTCATC
GGCATGCTGG CGTTCCGCCT GCCGATTCCG GTGGGCTATG ACCTGGCGTT GACGGTCTAT
TCGATGCTCG TGGCGATTCT GACCTCCGCG CTAGCGCTCT GGTTGACCTC ACGCGCGGAT
TTGTCCGTGC CACGGCTGGG CCTGGGTGCG CTGCTGATGG GGCTGGTCAT TGCGCTGATG
CATTACATGG GCATGGGCGC GCTGTGCATG GTCAAGGCGA TCAGCTATGA CCCACTGCTG
TTCGGGCTCT CGATCGCCAT CGCCATCGCC ATCGTCGCCT CTGCCGCTGC GTTATGGATC
GTCTTCCGGC TGCGCCACGA CGGGCATCGC TACAGTCTGC GCATGATCGC CGCCGTGATC
ATGGGCGTGG CGATCGTGGG CATGCATTAC ACCGACATGG CCGCCGCGCG GTTCGCACCC
GGCAGTTTGT GTGGAGTCGA GGCCGATACG CAGCTGCCAT TGTCGTGGCT GGCGGCAGTG
GTGCTGGTGA CCCTGGCCTT GCTGATACTG GCGCTGGTCA TTTCGGTGCT GTCGCGCCGT
TTTCAGCAGC GTACCGACGT GCTGATGCAA TCGCTGGCCA AGGCCAATGC TGACCTGACC
CTGGCGGCGC TACACGATCC ACTCACCCGA CTGCCCAACC GCGTGCTGCT GCACGAGCAT
CTCCTGCAGA ACATCGAACG CGCCCAGCGC CAGGGGCAGC GCTTTGCGGT GATGCTGATC
AACCTGGACG GCTTCAAGGT GATCAACGAC GGCTACGGCC ATCAGCTGGG CGACCGCCTG
CTGGTGGTGG TGGCCGAACG TTTGAACGCG CATCGGCGCG CGCATGGCAG CCTGGCACGG
CTGGGTGCGG ACGAGTTCGT GCTGGTGGCC GACATTGCAG ACCCGGGAGA TGCCGCCGCA
CTCGCCGCGC ATCTGGTGCA GGCACTGGCG GTGCCGTTCA TGGTTTCCAA CCACGAGTTG
CGTCTGAGCA GCAGCCTTGG CATCGCACAG TACCCGGAAG ACGCCACCAG CGGTCCCCAG
CTCCTGACGC ATGCCGACGC GGCGATGAAC CACGCCAAGC ACGCGGGCCG CAACCGCTAC
AGCTTTTTCG AACGCTCGAT GACGGCCACC ACCCGCGAAC GCCTGCAGTT GCTGCACGAA
CTGCCGCGCG CGCTGGAGCT GGGCCAGTTC GTGCTGCATT ACCAGCCCAA ATACTGCGCC
GAGGATGGCC GCCCGATCGG CGCCGAAGCG CTGATCCGCT GGCAGCATCC CGAACGCGGC
CTGGTGCCGC CGGACAGCTT CATCCCGCTG GCCGAACGCA GCGGCATGAT CGGCCTGCTC
GGCAGCTGGG TGCTGCGGCA GGCCTGCCGC CAGATGCACG ACTGGCGCGC GGCCGGGCAC
GGCGACTGGC GGGTGGCGGT CAATCTGTCG GCGATCCAGC TGGCCTCGCC CAGCTTGCTG
GACGAAGTGG CCACCACGCT CAGCGAGTTC ATGCTGGCAC CGGGCCAGCT CACCCTGGAA
ATCACCGAAA CCATGGCCAT GCGCGATGCC GAGGCCTGCC TGCGCACCCT CGGACAGCTC
AACGCACTGG GCGTGCGCAT CGCCATCGAC GACTTCGGCA CCGGCTATTC CAACCTGCTT
TATCTGCGCA AGCTGCCGGC GCACGAGCTC AAGATCGACC GCAGTTTTGT GCAGGCCATG
GACAGCAGTG CCGAAGACAT CGCCATCGTG GCCGCCGTGG TGGCACTGGC CCACACCATG
CGTCTGCAGG TAGTCGCCGA AGGCGTGGAA ACCATCGCCC AGCGCAACAC CCTGGAACGG
CTGGGCTGCG ACCAACTGCA AGGCTATCTG CTGGGCCGCC CGATGGACGC CGAACGCTTC
ATCGCCACCG TGGTCGCCCA GCGCAACGGC CCGCGCCGCC TGGCTCGCTG A
 
Protein sequence
MVGTYNLGMV MLSLVVAVLA FYTALPLVAW MTASRVGFAA AWLSGGAIAM GIGIWSMHFI 
GMLAFRLPIP VGYDLALTVY SMLVAILTSA LALWLTSRAD LSVPRLGLGA LLMGLVIALM
HYMGMGALCM VKAISYDPLL FGLSIAIAIA IVASAAALWI VFRLRHDGHR YSLRMIAAVI
MGVAIVGMHY TDMAAARFAP GSLCGVEADT QLPLSWLAAV VLVTLALLIL ALVISVLSRR
FQQRTDVLMQ SLAKANADLT LAALHDPLTR LPNRVLLHEH LLQNIERAQR QGQRFAVMLI
NLDGFKVIND GYGHQLGDRL LVVVAERLNA HRRAHGSLAR LGADEFVLVA DIADPGDAAA
LAAHLVQALA VPFMVSNHEL RLSSSLGIAQ YPEDATSGPQ LLTHADAAMN HAKHAGRNRY
SFFERSMTAT TRERLQLLHE LPRALELGQF VLHYQPKYCA EDGRPIGAEA LIRWQHPERG
LVPPDSFIPL AERSGMIGLL GSWVLRQACR QMHDWRAAGH GDWRVAVNLS AIQLASPSLL
DEVATTLSEF MLAPGQLTLE ITETMAMRDA EACLRTLGQL NALGVRIAID DFGTGYSNLL
YLRKLPAHEL KIDRSFVQAM DSSAEDIAIV AAVVALAHTM RLQVVAEGVE TIAQRNTLER
LGCDQLQGYL LGRPMDAERF IATVVAQRNG PRRLAR