Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00894 |
Symbol | |
ID | 6305942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 2473511 |
End bp | 2474689 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642639706 |
Product | tetratricopeptide repeat protein |
Protein accession | YP_001913566 |
Protein GI | 188576637 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0775107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACTTTC TGACCGAGTG GATCTGGTTC TTTCTGTTTG TGCCACTGGC CGCGCTGGGC GGCTGGATCG TCGGTCGTCG TGGCGGTCAG CGTCATGGCG ACACGCAGGT CAGTCGTCTT TCCAGCACCT ATTTCCGTGG GTTGAACTAT CTGCTCAACG AGCAGCCGGA CAAGGCGATC GAGCTGTTCC TGCATATCGC CGAACTGGAC AAGGAAACCT TTGAGACCCA GGTCGCATTG GGGCATTTGT TCCGTCGCCG CGGTGAAGTG GATCGTGCGA TCCGCCTGCA CCAGGGCCTG GTGCAGCGTG GCGACCTGAC CGATCAGCAG CGCGTCCAGG CCCTGCTGGC ACTCGGCGAG GATTACATGA AGTCCGGGTT GCTGGACCGT GCCGAAACGG TGTTCACCGA ACTGGCGCAG CTGGACCAGC GTGCACCGCA AGCGTTGCGT CACCTGATCG GCATCTATCA GGCCGAGCGC GATTGGGAAA AGGCAATCGA CAACGCCACC CGCTATGAAC AAGTGACCGG CGAGCCAATG GGCAAGCTGA TCTCCCAATT CGAATGCGAA CTGGCTGACC GCAATCGTGG CCTGGGCAAG ACCGACGATG CGTTGCAGGC GATCGCACGT GCCTACCAGG CCGATGGCAC CTCCGTGCGC GCCGGTATTT TGGAAGGGCG CATCGAAGCC GAGCGCGGTC ACGATGAAGC GGCGGTGCGC GCATTCGAGC GTGCAGCCCG GCACGATCCG GAATACCTGC CGGAGATCAT TCCTGCGTTG ATGGCTGCGT ATCGGCGGGT CGGCGATATC TCAGGGGCGC GCAATTTCTT GTCAGAAATG ACCGAGCACT ATCGCGGCAT CGCGCCGGTG CTGGCGCTGA CCCAGCTGAT CGAGGCCCAG GATGGCGTGG CGCCTGCGCT GGCCTATCTC GGCCGACAGC TCAAGGATCG CCCGTCGGTG CGTGGTGAAT CGGCGTTGAT CGACCTCACC CTGGCCGAGG GAAGCGACCC GGTCGGGACG CTGCAAGACC TCAAGCACAT CACCGACCAG TTGCTGGTGC GCAATCCGAG CTATCGGTGC ACGCGCTGCG GCTTCGGGGC CAAGACGCAC CACTGGCAGT GCCCGAGCTG CAAGGAGTGG GGTACGGTCA AACCGTTGTT GAACTACGCG GTGGTCTGA
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Protein sequence | MDFLTEWIWF FLFVPLAALG GWIVGRRGGQ RHGDTQVSRL SSTYFRGLNY LLNEQPDKAI ELFLHIAELD KETFETQVAL GHLFRRRGEV DRAIRLHQGL VQRGDLTDQQ RVQALLALGE DYMKSGLLDR AETVFTELAQ LDQRAPQALR HLIGIYQAER DWEKAIDNAT RYEQVTGEPM GKLISQFECE LADRNRGLGK TDDALQAIAR AYQADGTSVR AGILEGRIEA ERGHDEAAVR AFERAARHDP EYLPEIIPAL MAAYRRVGDI SGARNFLSEM TEHYRGIAPV LALTQLIEAQ DGVAPALAYL GRQLKDRPSV RGESALIDLT LAEGSDPVGT LQDLKHITDQ LLVRNPSYRC TRCGFGAKTH HWQCPSCKEW GTVKPLLNYA VV
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