Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00885 |
Symbol | |
ID | 6305953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 2481357 |
End bp | 2481896 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642639717 |
Product | phosphinothricin N-acetyltransferase |
Protein accession | YP_001913577 |
Protein GI | 188576648 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0203848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCCTCG AGCTGCGTGC AGTCCGCGCT GCGGACATCC CGGCGATCAC CGCGATCTAT GCGGAGCAGA TCGCCGGGGT CAACACCTAC GAATACAGCG CACCATCGCT CGATGAGATG CGCGCGCGGG TCAGTGCGAT CGTGGATGCA GGCTACTCCT ATCTGGTTGC CGAGCTCGAT GGTGTGGTCG CAGGCTATGC TTACGCCAGC GCATTTCGCG CGCGCGCAGG CTATCGTTGG ACGGTGGAAA ACTCGATCTA CTTAGCCACC GCGATGCAGG GCCGTGGCAT CGGCAAATCC TTGCTCGGCG AGCTGATCGC GGTGTGCGAG CAGCGCGGGT TCCTGCAGAT GATTGCGGTG ATTGGCGATG CCGACAATCT GGCCTCGCGG CAATTGCATG AACGTTTTGG ATTTCGCACG GTCGGACTAT TCACCGGAAT CGGCCGCAAA CACGGTCGCT GGTTGGACGG CGTGCAGATG CAACGCGCGA TCGGCTCCGG CGACACCGCC CCTCCTTCTG ATGCCCCCCC CTATGACTGA
|
Protein sequence | MPLELRAVRA ADIPAITAIY AEQIAGVNTY EYSAPSLDEM RARVSAIVDA GYSYLVAELD GVVAGYAYAS AFRARAGYRW TVENSIYLAT AMQGRGIGKS LLGELIAVCE QRGFLQMIAV IGDADNLASR QLHERFGFRT VGLFTGIGRK HGRWLDGVQM QRAIGSGDTA PPSDAPPYD
|
| |