| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00882 |
|---|
| Symbol | araQ |
|---|
| ID | 6305956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 2486734 |
|---|
| End bp | 2487570 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642639720 |
|---|
| Product | L-arabinose transport system permease protein AraQ |
|---|
| Protein accession | YP_001913580 |
|---|
| Protein GI | 188576651 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0407955 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGTG ATGTTGGCCA ATCGCGCTGG AATGCCGTGC TTATCAACGG CGGCCTGCTG
GTGCTGGCGG TGATCAGCCT GGCGCCGTTG CTGTGGATGC TGTCGGTGTC GTTCATGCCC
ACCGGCGAGG CCAGCCGGTT TCCGCCACCG ATGCTGCCAT CGGCATTCAC TCTGGCCAAC
TACCACGAGC TGTTTGCACG CACCGGCATG GCGCGCAACT TCGCCAACAG CCTGTTGGTC
TCCGGGCTGA TCACGCTCGG GTCGTTGCTG GTCAACACCA TGGCCGGTTA TGCGTTCGCC
AAGCTGCAGT TCGTCGGCCG CGAGCGCATC TTCAAGATCC TGATGGCGGC ATTGGTGATT
CCGGCGCAGG TGGCGATGCT GCCGCTGTTC CTGCTGATGA AGCAGTTGCA CCTGGTCAAC
AACATCGGCG GGGTGGTTGT GCCGGCGTTG GCCACGGTGT TCGGCATCTT CCTGGTGCGT
CAGTACGCGC GCAGCATTCC CGATGAATTG ATCGAAGCCG CGCGTGTCGA TGGCGCCAGC
GAGATGCGGA TCTTTTTCCA GATCGTGTTG CCGATGCTCA AGCCGGTGCT GGTGACCTTG
ACCATCTTCA CCTTCATGGG CTCGTGGAAC GATTTCATGT GGCCGCTGAT CGTGCTGACC
GACCAGGAGC AATACACCTT GCCGGTGGCG CTGGCGGCGC TGTCGCGCGA GCACATCATG
GACGTGGAAT TGATGATGGC CGGTGCCGTG GTGACGGTGA TTCCGGTGCT GCTATTGTTC
CTGGCGCTGC AGCGTTACTA CATCCAAGGT CTTCTGCTGG GGAGTGTGAA GGGGTGA
|
|---|
| Protein sequence | MSRDVGQSRW NAVLINGGLL VLAVISLAPL LWMLSVSFMP TGEASRFPPP MLPSAFTLAN
YHELFARTGM ARNFANSLLV SGLITLGSLL VNTMAGYAFA KLQFVGRERI FKILMAALVI
PAQVAMLPLF LLMKQLHLVN NIGGVVVPAL ATVFGIFLVR QYARSIPDEL IEAARVDGAS
EMRIFFQIVL PMLKPVLVTL TIFTFMGSWN DFMWPLIVLT DQEQYTLPVA LAALSREHIM
DVELMMAGAV VTVIPVLLLF LALQRYYIQG LLLGSVKG
|
|---|
| |