| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00878 |
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| Symbol | |
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| ID | 6305960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 2491544 |
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| End bp | 2494522 |
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| Gene Length | 2979 bp |
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| Protein Length | 992 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642639724 |
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| Product | TonB-dependent outer membrane receptor |
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| Protein accession | YP_001913584 |
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| Protein GI | 188576655 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.556038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCACC ACCACCCCCA TTCCGCCGGT CCGGCGCGCA AGCTACTGAG GTGTGCGCTG
GCCAGCTGCC TGCTGCTCGG CGCCGCACCG GCCTTCGCAC AGAGCACCGC TGCGACCATC
CGCGGCCAGG TCACCATCGA TGCCGCACCT GCCGCCCAGG CGCAGGTCAC CGCCACCAAC
CTGGCCACCG GCCTGACCCG CAGCGTGCAG GTCAGCAACG GCGGCTATTC GGTGGGCGGT
CTGCCGCCGG GTTCCTACCG CATCGATGTC ACCGCCAACG GCCAGACCAG CTCGCAGAAC
TTCACCGTGC AGGTCGGCCA GACGGCGACC TTGAACCTGG GCGTCGGCGG CGAGCCTGCC
ACGGCCGCGG GTGGTAACGC CACCACGCTG GACGCGGTGC AGGTGAAGGC GCCGCCGGTG
TTGGTCGAAA CGCGCACCTC CGAGAACGTC ACCTACATTT CCAACGTGCA GATCCAGAAC
CTGCCGCGTG CCACGCGCAA CTTCCTGGAA CTGGCCGACA CCGTGCCGAA CGTGCAGTTC
ACCCGCGAGG CCAACGGCAC CACCAAGGTA CGCACCGGCG CCACCTCGGC CGAAGGCACC
AACGTCTACA TCGACGGCGT GAGCCAGAAG AACTACGTGC TGACCGGCGG CGTCAGCGGC
CAGGATTCCA GCCGCGGCAA CCCGTTCCCG CAGTCGGCGA TTGGCGAATA CAAGGTCATC
ACCTCCAACT ACAAAGCCGA GTTCGACCAG GTCAGCGGTG CGGCCATCGT GGCGTCGTCC
AAGTCCGGCA CCAACGACTT CCACGGCAGC TTCTTCTGGG ACACCAGCAA CGACAGCTGG
CGCGAAGAGA GCCCGCTGGA GAAGAAGGCC GGTGTGCGCG ACGACTTCGA AGAAACCCAG
TACGGTGCCA CCTTCAGCGG CCCGATCCTC AAGGACAAGG CGCACTTCTT CATCGCTTAT
GAAGCCAAGG AATACACCAC CCCGAACGTG GTGATCCCCG GCTCGATCTA TTCGGACCGC
GTCGACCAAC TGCCGGTGCA GCTGCAGCCG CTGGTGGTGA CCTCCAGCAC GCCGTTCAAG
GAAGACCTGT ACTTCGGCAA GATCGACTGG ACCATCGGCC AGAACAACCT GTTCGAGCTG
ACCGGCAAGT ACCGCAAGGA AGACGAGCTC AACGATGTCG GCCAAACCGC GACCTACGAG
CACGGCAGCA TCAACGGCCA GGAAGAAAAG CGCGCCAACC TGCGTTGGCA GTATAGCGGG
GCCAACGTCC TCAACGAAGC CAACCTGAGC TACGAAAGCG CGTTCTGGAA CCAGGCGCCG
ATCAACAACG GCAATGGCTA CATCCTCAGC TACCCACCGG TGCGCGGCAA CGAGACCGAC
ATCCTGGCGG CGGGCGCCGG CAGCAGCTTC CAGCGCAAAG GCCAGAAGGG CTGGACCTTC
CAGGACGACC TGACCTTGAA CAGCCTGGAA TGGCATGGCG CGCATACCGT CAAGATGGGC
GTCAAGTTCA AGAGCATCGA TCTGGATTCG ACCCAATTCA ATCCGGTCAA TCCGCAGTAC
TACTACAACA TCCTCACCGA CGTCGAAACA CCGTACCGCG TGCGCTTCGG TGCGCCGCTG
GTGGAAGGTG GCGGCTCGGT GGTGTCCAAG AACAAGCAGT ACGGCATCTA CCTGCAGGAC
GACTGGGAGG TCAACGAGCA CTGGACCTTG AACCTGGGCG TGCGCTACGA CTACGAGCAA
ACCCCGGCGT TCCTGGATTC CGTGACCCCC TCGGATGTCG CCAGCGCGCT GCAGAACTGG
CCGAACCTGC GCAACGCCAA CTACACCATC AACGACTTCA TCAGTAGCGG CAATAACCGC
CAGGCATTCA AGAATGCCTG GCAGCCGCGT CTGGGCGCCT CGTACGACCT GTTCGGCGAT
CAGGCGCACG TGATCTATGG TGGAGCCGGC CGTGCGTACG ACCGCAACAT CTTCGATTAC
CTGGCACTGG AGCAGCTCAA CAACTCGTTC AAGTCGTATA GCTACTACGT CACCAGCGCC
AATAACGGTG CCTGCCTCGG CGACCCATGC ACCGCCTGGA ATCCGGCGTA CAACAACCAG
GAAGGCTTGA ACACGCTCAC GGACAACAGC ACCGGCGGTG GCGGACGTGA GGTGTATCTG
ATCGACAACA ACCTCAAGAC CCCGTATTCG GACCAATTCA GCATCGGCAT GCGCAACATG
GTGCCGTTGT GGGGCCAGGA CTGGTCTACC GACGTGACCC TGAGCCGCAT CGAGAGCCAT
GACGGTTTTG CGTTCGTGCG TGGTAACCGC CTGCCGGATG GGGCGTTCTT CCAGCCGGGC
ACCATCTCCG GGGCGCCGAC CGACGGCCCG AACGGCTATA GCGCCATCGT GCTGGGCACC
AACGGTGTAG AGACCGGCAA CACCCAGCTC GCGTTGCAGG TGGAAAAGCC CTTCGACGAA
GCATCTGGCT GGGGTCTGAC CGTGGCCTAC ACCTATTCCG ATGCGAAGGA AAACCGCCAG
TTCGGCGAGC ACTACGCACT GGACCGCGAA CGCATCCAGG ACTACGGCTG GCGTGAGGCT
GGCGGCATTC CGAACAATCG CCTGGTGGTC ACCGGCATCT ACGAGCTGCC GTATGAGATC
ACCTTGTCCG GCAAGCTGTC GCTGGCCAGC CAGACCGCGC GCTACGGCCA GAATTGCCTT
GCCGGCAACG ACCAGTGCGA GATCATCCAG TTCAAGCCGG ATGGCACGCT GGGCGACAAG
GAATTCAGTA TTGCCGCGAA TAAGGAATGG GACACCGGCG GCGGTGTCAA ATTCAATGTG
CGTGCGGATA TCCTCAACGT GTTCAACTGG GTGAATTACG CCACCTTCAA TGGCGATACC
GGAACATTGC AGGACTTGAA CACGGCTTAC GGTACTCCGA CCGGTGTGCT GGCGTCGCCG
ATGCGCACCT TCCGTTTGGC CTTCGGCCTG AACTGGTGA
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| Protein sequence | MRHHHPHSAG PARKLLRCAL ASCLLLGAAP AFAQSTAATI RGQVTIDAAP AAQAQVTATN
LATGLTRSVQ VSNGGYSVGG LPPGSYRIDV TANGQTSSQN FTVQVGQTAT LNLGVGGEPA
TAAGGNATTL DAVQVKAPPV LVETRTSENV TYISNVQIQN LPRATRNFLE LADTVPNVQF
TREANGTTKV RTGATSAEGT NVYIDGVSQK NYVLTGGVSG QDSSRGNPFP QSAIGEYKVI
TSNYKAEFDQ VSGAAIVASS KSGTNDFHGS FFWDTSNDSW REESPLEKKA GVRDDFEETQ
YGATFSGPIL KDKAHFFIAY EAKEYTTPNV VIPGSIYSDR VDQLPVQLQP LVVTSSTPFK
EDLYFGKIDW TIGQNNLFEL TGKYRKEDEL NDVGQTATYE HGSINGQEEK RANLRWQYSG
ANVLNEANLS YESAFWNQAP INNGNGYILS YPPVRGNETD ILAAGAGSSF QRKGQKGWTF
QDDLTLNSLE WHGAHTVKMG VKFKSIDLDS TQFNPVNPQY YYNILTDVET PYRVRFGAPL
VEGGGSVVSK NKQYGIYLQD DWEVNEHWTL NLGVRYDYEQ TPAFLDSVTP SDVASALQNW
PNLRNANYTI NDFISSGNNR QAFKNAWQPR LGASYDLFGD QAHVIYGGAG RAYDRNIFDY
LALEQLNNSF KSYSYYVTSA NNGACLGDPC TAWNPAYNNQ EGLNTLTDNS TGGGGREVYL
IDNNLKTPYS DQFSIGMRNM VPLWGQDWST DVTLSRIESH DGFAFVRGNR LPDGAFFQPG
TISGAPTDGP NGYSAIVLGT NGVETGNTQL ALQVEKPFDE ASGWGLTVAY TYSDAKENRQ
FGEHYALDRE RIQDYGWREA GGIPNNRLVV TGIYELPYEI TLSGKLSLAS QTARYGQNCL
AGNDQCEIIQ FKPDGTLGDK EFSIAANKEW DTGGGVKFNV RADILNVFNW VNYATFNGDT
GTLQDLNTAY GTPTGVLASP MRTFRLAFGL NW
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