Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00836 |
Symbol | hisH |
ID | 6305862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 2394738 |
End bp | 2395340 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642639628 |
Product | imidazole glycerol phosphate synthase subunit HisH |
Protein accession | YP_001913489 |
Protein GI | 188576560 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0118] Glutamine amidotransferase |
TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000000363706 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGATG TTGCGCTGAT CGATGCCGGT GGCGCCAATC TGGGCTCGGT GCGCTATGCA TTGGAGCGAC TGGGCGTTGA GGCACGCGTG GTGCGCGATG CAGCCGGCTT GCAGGGCGCG CAGCGGGTGA TACTGCCTGG TGTTGGCGCT GCGCCAGAGG TGATGTCGCG TTTGCGCGCG CAGGGCTTGG TCGCGCCATT GCGCGAGCTG CAGGTGCCGT TGATCGGTAT CTGCTTAGGG ATGCAGTTGC TGTTCGAACA TTCCGAAGAA GGCGATGTCG AGTGCCTGGG TCTGCTGCCG GGCATCGTGC GGCATATGAC GCCTGCGCTT GGCATTCGTG TGCCGCATAT GGGCTGGAAT CGGCTGGTGC CGATGCGCGA ATCCGCGTTG CTGGCCGGTT TGCCGGAGCG CGCCAGTGCG TATTTCGTGC ATGGTTACGC GGCGCCGGTC ACGGCCGACA CCGTGGCTGC CTGCGATCAC GGCGGCCTGT TCACTGCCAT CGTGCAGAAC GGCTTGCGCT GCGGCGCGCA GTTTCACCCT GAGCGGTCGG CCGACACCGG TGCACGCATC CTGCACAATT TTCTTGAGAT GAGCTTCCCA TGA
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Protein sequence | MTDVALIDAG GANLGSVRYA LERLGVEARV VRDAAGLQGA QRVILPGVGA APEVMSRLRA QGLVAPLREL QVPLIGICLG MQLLFEHSEE GDVECLGLLP GIVRHMTPAL GIRVPHMGWN RLVPMRESAL LAGLPERASA YFVHGYAAPV TADTVAACDH GGLFTAIVQN GLRCGAQFHP ERSADTGARI LHNFLEMSFP
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