Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00748 |
Symbol | asnC |
ID | 6305640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 2166459 |
End bp | 2167853 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642639408 |
Product | asparaginyl-tRNA synthetase |
Protein accession | YP_001913275 |
Protein GI | 188576346 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.430236 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGGTGG TCAGCGTTGA ACATGCGCTT GCGGGGAAGC TCCCCGAAGG CGGCGAAGTC ACGGTACGGG GGTGGGTACG CACCTTGCGC GGATCTGCCG GACTGGCCTT CATCAACGTG ACCGACGGCT CGTGCTTCGC TCCGATCCAG GTGGTAGCCA ACGACACGCT GCCCAATTTC GACGAGATCA AGCGCCTGAC CAGTGGCTGC TCACTGATCG CCAAGGGCGT GCTGGTGAAG TCGCAGGGCA AGGGCCAGTC GTTCGAGATC CAGGCCAGCG GCGTGGAGAT CGTCGGCTGG GTCGAAGACC CGCTGACCTA TCCGATCCAG CCCAAGCCGA TGACGCCGGA GTTCCTGCGC GAAGTGGCGC ACTTGCGCCC GCGCACCAAT CTGTTCGGCG CGGTCACACG TATCCGCAAC TGTCTGGCGC AGGCGGTGCA CCGCTTCTTC CACCAGAACG GCTTCAACTG GATCAGCACA CCCATCATCA CCACCTCCGA CGCCGAAGGC GCCGGGCAGA TGTTCCGCGT CTCCACGCTG GACATGGTCA ACCTGCCACG CGATGCCACT GGCAATGTGG ATTTCAGCCG CGACTTCTTC GGCAAGGAAA CCTTCCTCAC CGTGTCCGGC CAGCTCAACG TGGAGGCCTA CTGTCTGGCG CTGAGCAAGG TCTACACCTT CGGGCCAACC TTCCGCGCCG AGAACAGCCA TACCACGCGC CACCTGGCCG AGTTCTGGAT GATCGAGCCG GAGATCGCCT TTGCCGATCT GGCCGAAGAC GCGCGCCTGG CCGAGCAGTT CCTCAAGTAT GTGTTCCGCG CGGTGCTGGA CGAACGTGGC GACGATCTGG CGTTCCTCGC CGAGCGCGTG GACAAGAACG CGATCAGCAA GCTGGAAGCC TTCATCAATG CGCCGTTCGA GCAGATCGAC TACACCGATG CGGTCAAGCT GCTGCAACAC GCTGGCAAGA CCTTCGATTT CCCGGTGGAA TGGGGCCTGG ACCTGCAGAC CGAGCACGAA CGCTGGCTGA CCGAAGAACA TATCGGCCGC CCGGTGGTGG TCACCAATTA TCCCGAGCAC ATCAAGGCGT TCTACATGCG CTTGAACGAC GACGGCAAGA CCGTCGCCGC GATGGACGTG CTGGCACCGG GTATCGGCGA GATCATCGGC GGCAGCCAGC GCGAAGAGCG CCTGGATGTG CTCGACGCAC GCATGGCGCA GTTCGGCCTG GATAAGGAGC ACTACAGCTG GTACCGCGAT TTCCGTCGCT ACGGCTCGGT GCCGCATGCC GGCTTCGGTT TGGGCTTCGA GCGTCTGGTG GTCTATGTCT GCGGGCTAAG CAACATCCGC GACGCGATCC CCTACCCGCG CGCGCCGGGC AGCGCGGAAT TCTGA
|
Protein sequence | MTVVSVEHAL AGKLPEGGEV TVRGWVRTLR GSAGLAFINV TDGSCFAPIQ VVANDTLPNF DEIKRLTSGC SLIAKGVLVK SQGKGQSFEI QASGVEIVGW VEDPLTYPIQ PKPMTPEFLR EVAHLRPRTN LFGAVTRIRN CLAQAVHRFF HQNGFNWIST PIITTSDAEG AGQMFRVSTL DMVNLPRDAT GNVDFSRDFF GKETFLTVSG QLNVEAYCLA LSKVYTFGPT FRAENSHTTR HLAEFWMIEP EIAFADLAED ARLAEQFLKY VFRAVLDERG DDLAFLAERV DKNAISKLEA FINAPFEQID YTDAVKLLQH AGKTFDFPVE WGLDLQTEHE RWLTEEHIGR PVVVTNYPEH IKAFYMRLND DGKTVAAMDV LAPGIGEIIG GSQREERLDV LDARMAQFGL DKEHYSWYRD FRRYGSVPHA GFGLGFERLV VYVCGLSNIR DAIPYPRAPG SAEF
|
| |