| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00597 |
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| Symbol | |
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| ID | 6305797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 2328417 |
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| End bp | 2329667 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642639563 |
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| Product | lipoprotein releasing system transmembrane protein |
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| Protein accession | YP_001913427 |
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| Protein GI | 188576498 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.429172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACCGCA TGTTCAAACC TATCCCGGTT GCCATCGGCT TGCGCTATCT GCGTGCCAAG
CGGCGCAATG GCTTCATTTC GTTTATCTCG ATGGCGTCGA TCCTGGGCAT TGCCCTGGGC
GTGACCGTGC TGATCACCAC GCTGGCAGTG ATGAGCGGTT TTCAGAAGGA AATCCGCGAC
CGCCTGCTGC AGATGGCCGC ACATGCCACC GTCAGCGCAG AAGGCGCGCC GATGCGCGAT
TGGCAGCATG CGGTCGAGGT CGCCATGTCC GATCCGCGCG TGGCCGGTGC CGCGCCGTAC
ATCGAAACCG AATCCTTGTT GCAGGGTCCG CGCAAGCAGC CGGCCATCGT GCGCGGTGTG
ATTCCTGCCG AAGAAGGCAA GGTGTCGGTG CTGGCCAAGA AGATGCAGCA GGGTTCGGTC
GATAGCCTGA CGCCGGGTTC TTACAACATC GTCATCGGCA AGGAGCTGGC GTTGTGGCTG
GGCGTGGATG TCGGCGACAG CGTCGTCGTG TTGCTCAGCG ACACCCAGGC CACGCCGCTG
GGCGCAATGC CGCGGCTCAA GCGTTTCACC GTCAGCGGTA TTTTCGAAGC CGGCTACAAC
GAAATCGATC GCGGCCTGGC CGTGGTCAAC ATGCAGGATC TGGCGCGCGT GCTGCGCATG
GATGGCGTCA CCGGCGTGCG CCTGCGCCTC CACGACATGG ATCAGGCCTG GCCGGTGGCG
CGCGATCTGG CGGTGAAATT GCATGGCCCG TATCGGGTCA GCGACTGGAC CCAGGAAAAC
GCCAACCTGT ACCACTCGTT GAAGATGGAA AAGACCGTGA TGGGCATCCT GCTGTCGCTG
ATCGTGGCGA TGGGCGCGTT CAACCTGGTG TCCTCGCAGG TGATGCTGGT AACCGATAAG
CAGGCCGATA TCGCCATCCT GCGCACGCTC GGCTTGTCGC CGGGCGGTGT GATGCAGGTG
TTCATGGTGC AAGGCTCGTT GATCGGCTTT ATGGGGACCT TCATGGGCGT GATCGGCGGC
ATCGTGCTGA CGCTCAACCT TGAACGCATC CTTGGCGTGA TCGAAGCGAT TTTCAGCGTC
AAGTTGTTGC CTGAAGACGT GTACTACATC ACCGGCCTGC CCACCGATAT GCAGACCCAG
GACGTGGTGG TGATCACCGT GGTGGCGTTG GTGATGAGTT TCCTGGCGAC CCTGTACCCG
GCGTGGCGCG CCTCGCGCAC CCAGCCTGCG GAGGCGCTGC GTTATGAATG A
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| Protein sequence | MNRMFKPIPV AIGLRYLRAK RRNGFISFIS MASILGIALG VTVLITTLAV MSGFQKEIRD
RLLQMAAHAT VSAEGAPMRD WQHAVEVAMS DPRVAGAAPY IETESLLQGP RKQPAIVRGV
IPAEEGKVSV LAKKMQQGSV DSLTPGSYNI VIGKELALWL GVDVGDSVVV LLSDTQATPL
GAMPRLKRFT VSGIFEAGYN EIDRGLAVVN MQDLARVLRM DGVTGVRLRL HDMDQAWPVA
RDLAVKLHGP YRVSDWTQEN ANLYHSLKME KTVMGILLSL IVAMGAFNLV SSQVMLVTDK
QADIAILRTL GLSPGGVMQV FMVQGSLIGF MGTFMGVIGG IVLTLNLERI LGVIEAIFSV
KLLPEDVYYI TGLPTDMQTQ DVVVITVVAL VMSFLATLYP AWRASRTQPA EALRYE
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