Gene PXO_00582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_00582 
SymboluvrC 
ID6305812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp2342348 
End bp2344204 
Gene Length1857 bp 
Protein Length618 aa 
Translation table11 
GC content65% 
IMG OID642639578 
Productexcinuclease ABC subunit C 
Protein accessionYP_001913442 
Protein GI188576513 
COG category[L] Replication, recombination and repair 
COG ID[COG0322] Nuclease subunit of the excinuclease complex 
TIGRFAM ID[TIGR00194] excinuclease ABC, C subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCAG GGCCCCAAAG CGATTTCGAC GGAAAAGCGT TTGCTGCGCA ACTGAGCACC 
GCGCCTGGCG TCTACCGCAT GTATGCGGGC GACGACACCT TGTTGTACGT CGGCAAGGCG
GGCGCGCTGC GTAAGCGCGT TGGCAGCTAT TTCAACGGCA CGCCAAAAAA TGCCCGATTG
ACCTCGATGT TGTCGCAGGT TGCGCGCATG GATGTGACCG TCACCCGCAG CGAAGCCGAA
GCGCTGCTGC TGGAAAACCA GCTCATCAAG TCGCTGTCGC CGCGCTACAA CGTCTCGCTG
CGCGACGACA AGAGTTATCC GTACGTGTTG TTGACGCGCG AACACTGGCC ACGCATCGCC
TTGCACCGGG GTCCGCGTGC CGTGCAGGGG CGTTATTTCG GTCCTTACAC CGGCGTGACC
GGCGTGCGCG AAACGCTCAG CCTGATGCAC AAGTTGTTCA AGCTGCGCAG CTGCGAAGAC
AGCGTGTTCC GCAACCGCTC GCGGCCCTGC CTGCAATATC AGATTGGACG TTGTAGTGGG
CCGTGCGTGG ACCTGGTGGC GGCGCCCGAT TACGCCGAGT CGGTGCGTCG CGCCACCATG
TTTCTCGAAG GCAAGAGCGA TCAGCTCGGC GAAGAGATCA TGCAGTCGAT GCAGCAGGCC
AGCGAGGCGC TGGAGTTCGA GCGCGCCGCA CGCTTACGCG ATCTGCTGTC GTCGTTGCGC
AGCATGCAGA ACCGCCAATA CGTCGACGGC CGCGCAGCCG ATCTGGATGT GCTGGCCTGC
GCTACGCAAT CCAGTCAGGC CTGCGTACTG CTGCTGAGTT TTCGCGATGG CCGCAATCTC
GGCACGCGCT CGTTCTTTCC CAAGACCAAT GGTGAAGACA GCGCAGACGA AATCCTCGGT
GCGTTCGTGT CGCAGTACTA CGCCGAGCAT TCGCCGCCGC GCGAGATCCT GCTCGACCGC
GAAATCCCGG AGACGGAGCT AATCGAGGCC GCCCTCAGTA CCGCGGCCGA ACACAAGGTG
GCGCTCAAGT GGAACGTGCG CGGCGAGCGT GCCGGTTATC TGCTGCTGGC CACGCGTAAC
GCCCAGCTGA CCCTGGTTAC CGAGCTCACC AGCCAGAGCG CGCAGCACGC ACGCAGCGAG
GCCTTGCGCG AGATGCTCGG GCTGGCCGAG CCGGTCAAAC GCGTGGAGTG CTTCGACATC
AGCCACACGA TGGGCGAGGC AACCGTCGCC TCTTGCGTGG TGTTCGATGC CAGCGGCCCG
GTGCGTGGCC AGTATCGACG CTTCAATATT TCCGGCATCA CCCCGGGCGA CGATTACGCA
GCCATGCGGC AGGCAATCGA GCGTCGCTTC CGTCGCGCGG TGGAAGAGAA CGGCGTGCTG
CCCGACGTGC TGCTGATCGA TGGCGGCGCC GGTCAGCTGG CGCAGGCACA GGCTGCGCTG
GCCGACCTGG GGGTCGAGAA CGTGTGGCTG GTCGGCGTGG CCAAGGGCGA AGAGCGCCGG
GCAGGGCACG AAGCATTGAT CATGGCCGAC GGCCGCGAGT TGCGGCCAGG CGCCGCGTCG
CCGGCACTGC AATTCATCCA GCAGGTGCGT GACGAAGCGC ACCGCTTTGC CATCACCGGC
CACCGTGGGC GTCGCCAGAA GGCGCGCATG ACCAGCAAGC TTGAGGATAT TCCCGGCATC
GGCCCGCGGC GTCGCGCAAG TCTGCTCAAG CATTTTGGTG GGCTGGTCGG GCTCAAAGCG
GCCGGCGAGG CCGAGATTGC GCGGGTGGAG GGGGTCAATG CCGCACTTGC CGCGCGAATC
TACGCTAACC TGCACGGGCT GGCGCTTCCC GATGCGGCAG GCGAGTCGAG TCCGTAA
 
Protein sequence
MSAGPQSDFD GKAFAAQLST APGVYRMYAG DDTLLYVGKA GALRKRVGSY FNGTPKNARL 
TSMLSQVARM DVTVTRSEAE ALLLENQLIK SLSPRYNVSL RDDKSYPYVL LTREHWPRIA
LHRGPRAVQG RYFGPYTGVT GVRETLSLMH KLFKLRSCED SVFRNRSRPC LQYQIGRCSG
PCVDLVAAPD YAESVRRATM FLEGKSDQLG EEIMQSMQQA SEALEFERAA RLRDLLSSLR
SMQNRQYVDG RAADLDVLAC ATQSSQACVL LLSFRDGRNL GTRSFFPKTN GEDSADEILG
AFVSQYYAEH SPPREILLDR EIPETELIEA ALSTAAEHKV ALKWNVRGER AGYLLLATRN
AQLTLVTELT SQSAQHARSE ALREMLGLAE PVKRVECFDI SHTMGEATVA SCVVFDASGP
VRGQYRRFNI SGITPGDDYA AMRQAIERRF RRAVEENGVL PDVLLIDGGA GQLAQAQAAL
ADLGVENVWL VGVAKGEERR AGHEALIMAD GRELRPGAAS PALQFIQQVR DEAHRFAITG
HRGRRQKARM TSKLEDIPGI GPRRRASLLK HFGGLVGLKA AGEAEIARVE GVNAALAARI
YANLHGLALP DAAGESSP