Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00582 |
Symbol | uvrC |
ID | 6305812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 2342348 |
End bp | 2344204 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642639578 |
Product | excinuclease ABC subunit C |
Protein accession | YP_001913442 |
Protein GI | 188576513 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGCAG GGCCCCAAAG CGATTTCGAC GGAAAAGCGT TTGCTGCGCA ACTGAGCACC GCGCCTGGCG TCTACCGCAT GTATGCGGGC GACGACACCT TGTTGTACGT CGGCAAGGCG GGCGCGCTGC GTAAGCGCGT TGGCAGCTAT TTCAACGGCA CGCCAAAAAA TGCCCGATTG ACCTCGATGT TGTCGCAGGT TGCGCGCATG GATGTGACCG TCACCCGCAG CGAAGCCGAA GCGCTGCTGC TGGAAAACCA GCTCATCAAG TCGCTGTCGC CGCGCTACAA CGTCTCGCTG CGCGACGACA AGAGTTATCC GTACGTGTTG TTGACGCGCG AACACTGGCC ACGCATCGCC TTGCACCGGG GTCCGCGTGC CGTGCAGGGG CGTTATTTCG GTCCTTACAC CGGCGTGACC GGCGTGCGCG AAACGCTCAG CCTGATGCAC AAGTTGTTCA AGCTGCGCAG CTGCGAAGAC AGCGTGTTCC GCAACCGCTC GCGGCCCTGC CTGCAATATC AGATTGGACG TTGTAGTGGG CCGTGCGTGG ACCTGGTGGC GGCGCCCGAT TACGCCGAGT CGGTGCGTCG CGCCACCATG TTTCTCGAAG GCAAGAGCGA TCAGCTCGGC GAAGAGATCA TGCAGTCGAT GCAGCAGGCC AGCGAGGCGC TGGAGTTCGA GCGCGCCGCA CGCTTACGCG ATCTGCTGTC GTCGTTGCGC AGCATGCAGA ACCGCCAATA CGTCGACGGC CGCGCAGCCG ATCTGGATGT GCTGGCCTGC GCTACGCAAT CCAGTCAGGC CTGCGTACTG CTGCTGAGTT TTCGCGATGG CCGCAATCTC GGCACGCGCT CGTTCTTTCC CAAGACCAAT GGTGAAGACA GCGCAGACGA AATCCTCGGT GCGTTCGTGT CGCAGTACTA CGCCGAGCAT TCGCCGCCGC GCGAGATCCT GCTCGACCGC GAAATCCCGG AGACGGAGCT AATCGAGGCC GCCCTCAGTA CCGCGGCCGA ACACAAGGTG GCGCTCAAGT GGAACGTGCG CGGCGAGCGT GCCGGTTATC TGCTGCTGGC CACGCGTAAC GCCCAGCTGA CCCTGGTTAC CGAGCTCACC AGCCAGAGCG CGCAGCACGC ACGCAGCGAG GCCTTGCGCG AGATGCTCGG GCTGGCCGAG CCGGTCAAAC GCGTGGAGTG CTTCGACATC AGCCACACGA TGGGCGAGGC AACCGTCGCC TCTTGCGTGG TGTTCGATGC CAGCGGCCCG GTGCGTGGCC AGTATCGACG CTTCAATATT TCCGGCATCA CCCCGGGCGA CGATTACGCA GCCATGCGGC AGGCAATCGA GCGTCGCTTC CGTCGCGCGG TGGAAGAGAA CGGCGTGCTG CCCGACGTGC TGCTGATCGA TGGCGGCGCC GGTCAGCTGG CGCAGGCACA GGCTGCGCTG GCCGACCTGG GGGTCGAGAA CGTGTGGCTG GTCGGCGTGG CCAAGGGCGA AGAGCGCCGG GCAGGGCACG AAGCATTGAT CATGGCCGAC GGCCGCGAGT TGCGGCCAGG CGCCGCGTCG CCGGCACTGC AATTCATCCA GCAGGTGCGT GACGAAGCGC ACCGCTTTGC CATCACCGGC CACCGTGGGC GTCGCCAGAA GGCGCGCATG ACCAGCAAGC TTGAGGATAT TCCCGGCATC GGCCCGCGGC GTCGCGCAAG TCTGCTCAAG CATTTTGGTG GGCTGGTCGG GCTCAAAGCG GCCGGCGAGG CCGAGATTGC GCGGGTGGAG GGGGTCAATG CCGCACTTGC CGCGCGAATC TACGCTAACC TGCACGGGCT GGCGCTTCCC GATGCGGCAG GCGAGTCGAG TCCGTAA
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Protein sequence | MSAGPQSDFD GKAFAAQLST APGVYRMYAG DDTLLYVGKA GALRKRVGSY FNGTPKNARL TSMLSQVARM DVTVTRSEAE ALLLENQLIK SLSPRYNVSL RDDKSYPYVL LTREHWPRIA LHRGPRAVQG RYFGPYTGVT GVRETLSLMH KLFKLRSCED SVFRNRSRPC LQYQIGRCSG PCVDLVAAPD YAESVRRATM FLEGKSDQLG EEIMQSMQQA SEALEFERAA RLRDLLSSLR SMQNRQYVDG RAADLDVLAC ATQSSQACVL LLSFRDGRNL GTRSFFPKTN GEDSADEILG AFVSQYYAEH SPPREILLDR EIPETELIEA ALSTAAEHKV ALKWNVRGER AGYLLLATRN AQLTLVTELT SQSAQHARSE ALREMLGLAE PVKRVECFDI SHTMGEATVA SCVVFDASGP VRGQYRRFNI SGITPGDDYA AMRQAIERRF RRAVEENGVL PDVLLIDGGA GQLAQAQAAL ADLGVENVWL VGVAKGEERR AGHEALIMAD GRELRPGAAS PALQFIQQVR DEAHRFAITG HRGRRQKARM TSKLEDIPGI GPRRRASLLK HFGGLVGLKA AGEAEIARVE GVNAALAARI YANLHGLALP DAAGESSP
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