Gene PXO_00524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_00524 
SymbolyajC 
ID6305581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp2115678 
End bp2116031 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content64% 
IMG OID642639349 
Productpreprotein translocase subunit YajC 
Protein accessionYP_001913216 
Protein GI188576287 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTGC TCGATTTCCT GATCCCCGCC GCCCAGGCGC AAGCCACTGG CGCCGCGCCG 
GCACCCGGCC CGCTGGGTGG TCTGTCCACC TTCGCGCTGC CGGTCATCCT GATTGCGGTC
ATGTACTTCC TGATGATCCG CCCGCAGATG AAGCGTCAGA AAGAGCACAA GGCGCTGCTG
GACAAGCTGG CGCGCGGCGA TGAGGTCATT ACTTCCGGCG GCGTTGCCGG CGTGATCACC
GAGATCGGCG ACAACTTCAT CAGCGTGGAA GTGGCCGACA ACGTGCGGAT CCGCGTGCAG
AAGAGCGCCG TGGGCCATGT GCTGCCGAAG GGCACGCTGA AGTCGGCTAG CTAA
 
Protein sequence
MNLLDFLIPA AQAQATGAAP APGPLGGLST FALPVILIAV MYFLMIRPQM KRQKEHKALL 
DKLARGDEVI TSGGVAGVIT EIGDNFISVE VADNVRIRVQ KSAVGHVLPK GTLKSAS