| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00459 |
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| Symbol | oprN |
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| ID | 6305396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1941308 |
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| End bp | 1942801 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642639165 |
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| Product | outer membrane protein OprN |
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| Protein accession | YP_001913038 |
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| Protein GI | 188576109 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.018305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCTGA TCCGCATGCC ACTGGCTGTG GCGTTGAGCA CGCTGATGCT TGGTGGCTGC
ATGCTCGGCC CCAACTACAC CAAGCCGCCA GCCGTGGCCG ATGCGGCGAT GCAGGCGCCG
GCCCTGCATC GCGCCAGTGG TGCAGACGTC GTGGCAGCTG CACCGTTGAA CCACTGGTGG
GAAGAACTGC AGGACCCGAC CCTCACCCAG CTGGTCACCC AGGCATTGGC CGACAGCCCC
AACCTGCGCG CCGCGCAGGC GCGGTTACGC GCCAACCGCG CGCTGGCACA GCGACGCCGC
GCCGAGCGCT TGCCCACGCT CAATGCCAGC GCGCTGTATG CCTACGCCGA GCCGCCGCAC
ACCATCGTCG ACACGCTGGG TGGGCTGCAG CAGCAAGGCC AACCCGGTCA GCCGCCGGCT
GCCGGCAACC AGGCGCTGGA TCTTGAAAAG ACCCAGATCT ACAGCGCCGG TTTCGATGCG
AGCTGGGAGC TGGATGTCTT CGGCCGCCGC CGCCGCGCCG CCGAAGGTGC GCTGGCACAG
GCGCAGGCCT CCGAGGCCGA GCTGGCCGAT GCGCAAGTGC AGCTGGCCGC CGAAGTCGGG
CAGGTCTATC TCAACTACCG CGGCTTGCAG GCGCGCCTGG CCATCGCCGA TGCCAACCTG
GACAAGATCC GCCAGACGTT GCAGTTGGTG CAGCAACGTC GTGGGCAGGG CGCCGCGTCG
GATCTGCAGG TCGAGCAGAT CGCCACCCAG GTGCAGCAGC AGCAAGCGCA GCGCCTGCCG
CTGGAAATGC AATCGCAAGA AGCGCAGGAC CAGCTGGCGC TGATGGTCGG GCGCGCGCCC
GGCGCGCTGG ATTCCCTGCT GAGCGCGCCG CAGCCGCTGC CGATGTTGCC CACCCAGGTG
CGCGTGGACG ATGCCGGCGC GTTGATCCGC CGGCGCCCGG ACGTGCGCAA GGCCGAGCGT
GAGCTGGCCG CGTCCAGTGC GCAGATCGGC GAGGCCTTGA ACGGCTATTT CCCGCAGGTG
AGTCTGCTGG GCGGGTTGAG TTGGGTCGCC GGCTCGCCGA GCGATTTCAA TTCCGATGCG
CTGGCCAGGT TTGCGGTGCC GATGCTGCGC TGGTCGATCT TCGATTTCGG CAAGACCCGC
GCGCAGGTGG AGCAGGCGCG CGCCAGCAAT GCCGGTCGTA CGGCAGCGTA CGAAGGGACC
GTGCTGGCTG CCTTGCAGGA TGCCAATTCG GCGTTGGCGC GCTTCGGTTC GGCACGCAAG
CAACTGGTGG TCGCACGCCA GGCCGAAGCC TCGGCCACGC GTTCGGCCGG GCTGATGCAG
CAACGGCGCG ATGCCGGTGC CACCTCGTCC ATCGATCTGC TGGATGTGCA ACGCCAGCAG
TTGTCGGCGC AGGACGCTGC CGCGCAGGCC CAGGTGCAGT TGCTGGTGAA TTACGTGGCC
CTGCAGAAGA GTCTGGGGCT GGGCTGGAGC GAGCAGGCGC AGGAGGCACG CTGA
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| Protein sequence | MRLIRMPLAV ALSTLMLGGC MLGPNYTKPP AVADAAMQAP ALHRASGADV VAAAPLNHWW
EELQDPTLTQ LVTQALADSP NLRAAQARLR ANRALAQRRR AERLPTLNAS ALYAYAEPPH
TIVDTLGGLQ QQGQPGQPPA AGNQALDLEK TQIYSAGFDA SWELDVFGRR RRAAEGALAQ
AQASEAELAD AQVQLAAEVG QVYLNYRGLQ ARLAIADANL DKIRQTLQLV QQRRGQGAAS
DLQVEQIATQ VQQQQAQRLP LEMQSQEAQD QLALMVGRAP GALDSLLSAP QPLPMLPTQV
RVDDAGALIR RRPDVRKAER ELAASSAQIG EALNGYFPQV SLLGGLSWVA GSPSDFNSDA
LARFAVPMLR WSIFDFGKTR AQVEQARASN AGRTAAYEGT VLAALQDANS ALARFGSARK
QLVVARQAEA SATRSAGLMQ QRRDAGATSS IDLLDVQRQQ LSAQDAAAQA QVQLLVNYVA
LQKSLGLGWS EQAQEAR
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