| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00407 |
|---|
| Symbol | phaR |
|---|
| ID | 6305452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 1994322 |
|---|
| End bp | 1994963 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642639221 |
|---|
| Product | polyhydroxyalkanoate synthesis repressor PhaR |
|---|
| Protein accession | YP_001913093 |
|---|
| Protein GI | 188576164 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5394] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.556278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCTGTTG CAAGCGCTGC TGCGGTGCGC CATCCTGCGC GCACTATCAG TGTGGGTGAA
CGTTCCATGG CCGGACTTCG CATCATCAAG AAGTATCCCA ATCGCCGTCT CTACGACACG
GAAATCTCCA GCTATATCAC CATCGAAGAT GTGCGCCAAT TGATCATCGA TGGCGAAGAA
TTCGAGGTAC GCGATGCCAA GAGTGGCGAA GACCTGAGCC GCGCGGTGCT GCTGCAAATC
ATCGCCGACC GCGAACAGGA CGGCGAGCCG ATGCTCTCCA CCCAGCTGCT GAGCCAGATC
ATCCGGTTCT ATGGCGATTC GCTGCAGGGC TTCATGGGCA ACTACCTGGA GCGCAGCATG
CAGGTGTTCC TGGATCAGCA GCAGCAGTTC CGCCAGCAGA TGGGCAACCT GCTCGGGCAG
ACGCCATGGG CGATGATGAA CCAGCTGACC GAGCGCAACC TGGAGTTGTG GCAGGAGTTC
CAGCGCAATT TCGGCGCCGG CTTCGGTCGC CCGGTTGGCC CTGGCACGCC GGCGAACCCG
CCCGGTGCAA GCGGCCTGGG CAGCGGCCCG ATTGGAACCG GCACGCACGG CACGCCGAAC
AATCATCACG GCACCACCGG CAAGGCCCGC AACCGCGGCT AA
|
|---|
| Protein sequence | MAVASAAAVR HPARTISVGE RSMAGLRIIK KYPNRRLYDT EISSYITIED VRQLIIDGEE
FEVRDAKSGE DLSRAVLLQI IADREQDGEP MLSTQLLSQI IRFYGDSLQG FMGNYLERSM
QVFLDQQQQF RQQMGNLLGQ TPWAMMNQLT ERNLELWQEF QRNFGAGFGR PVGPGTPANP
PGASGLGSGP IGTGTHGTPN NHHGTTGKAR NRG
|
|---|
| |