| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00169 |
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| Symbol | ispD |
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| ID | 6305183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1704377 |
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| End bp | 1705195 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642638954 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_001912830 |
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| Protein GI | 188575901 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.17204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGTT CGATCTGGGC CGGCTCCATT TGGGCAATCG TGCCGGCTGC GGGGCGCGGC
ACGCGTTTTG GTGGGCCGCT TCCCAAGCAA TATCTGCAGG CCGGCGGCCA GCCCTTGATG
GCGTACACGC TGATGGCGCT GGCGGCGCAT CCGGCGCTGG CCGGCATCGT GGTGGCGATC
GCCCCCGACG ATGCCGATTG GCCGGGCTGG ACTGCCGTGC AGTCCAAACC CGTGCTCACC
TGCCTGGGGG GCGCGACGCG TGCAGCCTCG GTGCTGGCTG GTGTGCTGGC CTTGCCCGAA
AGCGTACGCG CCGACGATTT CGTGCTGGTG CACGATGCCG CGCGGCCGAA TCTGGCCCTG
GCCGATCTGG ACCGCCTGCT GGAAATCGGT CGCGGCGACC CGGTGGGCGC GATCCTGGCC
GCACCGGTAC GCGACACGCT CAAACGTGCC GGCGACGATG GCGGCATCGA CGGCACCGAA
CCACGCGAAC GTCTGTGGCG CGCACTCACG CCGCAGTTGT TTCGGCGCCA TCAATTGATC
CGTGGCCTCA CCGAGGCCTC GGCTGCCGGT GTGGACGTCA CCGATGAGGC GATGGCGATG
GAGCGGATGG GGCTGCGCCC ATTGCTGGTG GAAGGCGCCG AAGACAACTT CAAGGTGACC
ACGCCGGCGG ATCTGGCGCG CTTCGAATTC GAATTGGCGC GCCGCGGCAT TGCGGTCGAT
GCCGATGCGC TTGAGGCGCC GGCCGTCAAT GCGCAGAGCA ACGCGCGCAA CGTGGCAACG
CAGCTCGCTA CAGTCAGCTA CGGTAACGAC GCCACTTAG
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| Protein sequence | MTGSIWAGSI WAIVPAAGRG TRFGGPLPKQ YLQAGGQPLM AYTLMALAAH PALAGIVVAI
APDDADWPGW TAVQSKPVLT CLGGATRAAS VLAGVLALPE SVRADDFVLV HDAARPNLAL
ADLDRLLEIG RGDPVGAILA APVRDTLKRA GDDGGIDGTE PRERLWRALT PQLFRRHQLI
RGLTEASAAG VDVTDEAMAM ERMGLRPLLV EGAEDNFKVT TPADLARFEF ELARRGIAVD
ADALEAPAVN AQSNARNVAT QLATVSYGND AT
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