| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00147 |
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| Symbol | alaS |
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| ID | 6305205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1724277 |
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| End bp | 1726925 |
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| Gene Length | 2649 bp |
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| Protein Length | 882 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642638976 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001912852 |
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| Protein GI | 188575923 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.328967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAC CTGCCAAATT CAGCACTTCC CAGATCCGTA GCGACTTCCT CGCGTTCTTC
GAGGGGAGGG GCCACACCAT CGTGCCATCC GCGCCGCTGG TGCCGGGTAA CGACCCCACC
TTGCTGTTTA CCAACTCCGG CATGGTCCAG TTCAAGGACG TCTTCCTTGG CGCGGAGAAA
CGCAGTTACG TGCGTGCCGC TGACGTGCAG CGCTGCCTGC GTGCCGGTGG CAAGCACAAC
GATCTGGACT CGGTCGGCTA CACCGCGCGT CACCACACCT TCTTCGAAAT GCTAGGCAAC
TGGTCGTTCG GCGACTATTT CAAGAAGGAC GCCATCGCCT GGGCATGGGA ACTGCTGACC
CAGATCTGGA AGCTGCCGAC AGACCGTCTG TTGGTCACCG TCTACCACAC CGACGAAGAA
GCTTTTGCGT TGTGGCGCGA CATGATCGGC ATCCCGGAAA GCCGCATCGT GCGCATCGGC
GACAACAAGG GTGCGCCCTA CGCGTCGGAT AATTTCTGGC AAATGGCCGA CACCGGCCCG
TGCGGCCCGT GTACCGAAAT TTTCTTCGAC CACGGCGATC ACATCGCTGG TGGTCCGCCG
GGGTCGCCGG ATGAGGATGG CGACCGCTTT ATCGAGATCT GGAACCTGGT CTTCATGCAG
TTCGATCGCC AGCCCGACGG CACACTGGTA CCTCTGCCAG CGCCATGCGT GGACACTGGC
ATGGGATTGG AGCGTCTTGC CGCGATCCTG CAGCATGTCC ATACGAACTA TGAAATCGAC
CTGTTCCAGG CGTTGATCGG CAAGGCCAGC GCGCTGACCG GCATCACCGA TCTGGAGAAC
AAATCGCTGC GGGTGATCGC CGATCACATC CGCGCTTGTT CGTTTCTCAT CGTCGATGGT
GTGCTGCCCT CCAACGAAGG CCGCGGCTAT GTGCTGCGTC GGATTATCCG ACGTGCGCTG
CGCCATGGTT GGATGTTGGG CGTGCGCCAG CCGTTCTTCA GCAAGATGGT GCCCACGCTG
GTCGAACTGA TGGGCGAAGC CTACCCCGAG CTGGTGGTGG CGAAGGACAC CGTGGCGCGC
GCCTTGTTGG CCGAAGAAGA GCGTTTTGCG GAGACGCTGG ACGCCGGCAT GAAAATCTTC
GACGAGGTCG CGTCGCGCTC GCAGGACATT ATCCCGGGCG CCGATGCGTT CCGGTTGTAC
GACACCTATG GCTTCCCGGT CGACCTGACC GCCGATATCG CACGCGAGCG CGGCATGCGC
GTGGACATGG AGGGCTTCGA GTGCGCCATG GAGCGCCAGC GCGAGACTGC GCGTGCGGCC
GGCAAGTTCG GCGGCGGCGT GGCATTGCCC GCCGATCTGG TCGCCAGCAT GTCGCCAACG
GTGTTCCTGG GTTACGAAGC GTACGATGCC GATGCGCTCA GGGTCGTGGC GTTGCTCAAG
CAGGGCCGCC CGGTCGAACG TGCGCAGGCC GGCGACGAGG TGATCGTGTT CACCGACCGC
ACGCCGTTCT ACGCCGAGTC GGGTGGTCAG GTTGGCGATA GCGGTCAGCT GAACGGCCCC
GGTGTGTTGA TCGAAGTTGC CGACACGCAG AAGTTCGCCG GTCAGTTCCA TGGCCATGTG
GGTCGCATCA GCGAAGGCAC GCTCGCGCTT GGCGATGTGC TTGCCGGTGG GATCGACGTA
CAACGTCGCG GCAAGACCAT CCTCAACCAT TCGGCGACCC ATCTGCTGCA TGCCGCGTTG
CGCGAAGTGT TGGGAACGCA TGTTCAGCAG AAGGGCTCGC TGGTCGCACC GGATCGTCTG
CGCTTCGACT TCTCGCACTT CCAGCCGATC ACTGCGGATG AGCTTGCTGT GATCGAGCGC
AAGGTCAACG CCGAAGTGCG CACCAACCAT GGCGTGGAAG TGCATAACAT GGCCATGCAG
GAGGCGCTGG ATTTCGGCGC GATGGCGTTG TTCGGCGAGA AATACGGCGA AAACGTCCGC
GTGCTCAAGA TGGGCGGTTA TTCCACCGAA CTGTGTGGTG GCACGCATGT CACCCGTACC
GGCGACATCG GCCTGTTCAA GATCACCTCC GAAGGCGGCG TGTCCTCGGG AGTGCGTCGT
ATCGAAGCGG TGACCGGGCA GGGCGCGCTG GATTATGTGG CCGACGAAGA GCGTCGCTTG
CTTGAGGCTG CCCATTTGCT CGGCGGCAAC GCGACCGAGG TGGTGGACAA AGTGCGCGCA
CTGACCGAGC GTCAGAAGCG GCTGCAGCGC GAGCTGGAAT CGCTCAAGGC CAAGCTGGCG
TCGGGTGCAA CGGCTGACCT GGGCGCTGCT GCGATCGACG TCGCCGGGGT CAAGGTGGTG
GCAGTGCGTC TGGAAGGCTT CGATGCCAAG GCGCTGCGCG ATGCGATGGA TCGCCTGAAG
CAACAGCTCG GCGACTCTGT GATCGTGCTG GCTGGCGCTT CAGGCGGCAA AGTTGCGCTT
GTCTCTGGTG TGAACGGCAG CCCAACTGGC AAGGTGAAGG CAGGGGAACT TCTCAGCAAT
ATCGCCAGTC AGATCGGCGG CAAGGGCGGT GGCCGTCCAG ATCTCGCCCA GGGTGGTGGC
GAGGACGGGC CCGCCCTTGC GACCGCACTC GACGGTGTGC CCCTCTGGGT CAAGCAACAC
TTGGGCTGA
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| Protein sequence | MNAPAKFSTS QIRSDFLAFF EGRGHTIVPS APLVPGNDPT LLFTNSGMVQ FKDVFLGAEK
RSYVRAADVQ RCLRAGGKHN DLDSVGYTAR HHTFFEMLGN WSFGDYFKKD AIAWAWELLT
QIWKLPTDRL LVTVYHTDEE AFALWRDMIG IPESRIVRIG DNKGAPYASD NFWQMADTGP
CGPCTEIFFD HGDHIAGGPP GSPDEDGDRF IEIWNLVFMQ FDRQPDGTLV PLPAPCVDTG
MGLERLAAIL QHVHTNYEID LFQALIGKAS ALTGITDLEN KSLRVIADHI RACSFLIVDG
VLPSNEGRGY VLRRIIRRAL RHGWMLGVRQ PFFSKMVPTL VELMGEAYPE LVVAKDTVAR
ALLAEEERFA ETLDAGMKIF DEVASRSQDI IPGADAFRLY DTYGFPVDLT ADIARERGMR
VDMEGFECAM ERQRETARAA GKFGGGVALP ADLVASMSPT VFLGYEAYDA DALRVVALLK
QGRPVERAQA GDEVIVFTDR TPFYAESGGQ VGDSGQLNGP GVLIEVADTQ KFAGQFHGHV
GRISEGTLAL GDVLAGGIDV QRRGKTILNH SATHLLHAAL REVLGTHVQQ KGSLVAPDRL
RFDFSHFQPI TADELAVIER KVNAEVRTNH GVEVHNMAMQ EALDFGAMAL FGEKYGENVR
VLKMGGYSTE LCGGTHVTRT GDIGLFKITS EGGVSSGVRR IEAVTGQGAL DYVADEERRL
LEAAHLLGGN ATEVVDKVRA LTERQKRLQR ELESLKAKLA SGATADLGAA AIDVAGVKVV
AVRLEGFDAK ALRDAMDRLK QQLGDSVIVL AGASGGKVAL VSGVNGSPTG KVKAGELLSN
IASQIGGKGG GRPDLAQGGG EDGPALATAL DGVPLWVKQH LG
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