| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00120 |
|---|
| Symbol | |
|---|
| ID | 6305238 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 1746210 |
|---|
| End bp | 1746842 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642639009 |
|---|
| Product | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase |
|---|
| Protein accession | YP_001912882 |
|---|
| Protein GI | 188575953 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
|---|
| TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.254085 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCAG ATACCACCGC CAGCCCGTTC GCCCTGCCCC TGGTCGCCAT CCTGCGCGGC
ATCACGCCGG AAGAAACGCT CGACCATGTC GGCGCGCTGA TCGACGCCGG TTTCGATGCG
ATCGAAATCC CGCTCAACTC GCCGCGCTGG GAGCAAAGCA TCGCGCTGGC GCAACAGACC
TTCGGCGAAC GCGCCTGGAT CGGTGCCGGC ACCGTGCTGC GCAATGAAGA CGTCGACACC
CTGGTCGAGA TTGGCGCGCG CTTCATCATC ACCCCCAATA CGCGCCCGTC GCTGATCCGC
CATGCGGTGT CGCGCGGGCT GACCGTGGTG GCCGGCTTCG CCACTGCCAG CGAGGCGTTC
GACGCCATCG ACGCCGGCGC AACCATCCTC AAGCTGTTCC CGGCAGCGAC CTATGGCGCC
GCGCATGTGC GCGCCCTGCG CTCGGTGCTG CCCAAGCACA TCCCGGTGTA TGTGGTCGGC
GGCGTCAGCC CGCAGACCCT GGCCGGCTTC ATCGCCCAGG GTGCCGCCGG CGCCGGCATC
GGCGGCGAAC TGTACAAACC GGCGCAATCG CTCGAAACAA CCCAGACGCA TGCACGCGCC
TTCGTGCAGG CCTACCAGGA ACTGCAAGGA TGA
|
|---|
| Protein sequence | MTSDTTASPF ALPLVAILRG ITPEETLDHV GALIDAGFDA IEIPLNSPRW EQSIALAQQT
FGERAWIGAG TVLRNEDVDT LVEIGARFII TPNTRPSLIR HAVSRGLTVV AGFATASEAF
DAIDAGATIL KLFPAATYGA AHVRALRSVL PKHIPVYVVG GVSPQTLAGF IAQGAAGAGI
GGELYKPAQS LETTQTHARA FVQAYQELQG
|
|---|
| |