| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00086 |
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| Symbol | carB |
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| ID | 6305269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1772541 |
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| End bp | 1775783 |
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| Gene Length | 3243 bp |
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| Protein Length | 1080 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642639040 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_001912913 |
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| Protein GI | 188575984 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAGC GCACCGACCT TAAAACCATC CTGATCATCG GCGCCGGCCC GATCGTCATC
GGCCAGGCCT GCGAGTTCGA CTACTCCGGC GCGCAGGCGT GCAAGGCGCT GCGCGACGAG
GGTTATCGCG TGGTGCTGGT CAACAGCAAT CCGGCCACCA TCATGACCGA CCCGAACATG
GCCGACGCCG TGTACATCGA GCCGATCAAC TGGCAGACGG TCGAAAAGAT CATCTCCAAG
GAAAAGCCCG ATGCGTTGCT GCCGACCATG GGCGGACAAA CCGCACTGAA TTGCGCGCTG
GATCTGGCCG ACCACGGTGT GCTGGAGAAG TACAACGTCG AGCTGATCGG CGCCAAGCGC
GAAGCGATCC GCATGGCAGA AGACCGCGAG CTGTTCCGCG TGGCGATGGG CGAGATCGGC
CTGGATTGCC CGAAAGCTGC AGTGGCCCAC ACGCTCGAAG AAGCGCTAGA GATCCAGACC
CGCGTCGGCT ACCCGACCAT CATCCGCCCC AGCTTCACCC TGGGCGGTAG CGGTGGCGGC
ATCGCCTACA ACCGCGAAGA GCTGATCGAG ATCGTCGGCC GCGGCCTGGA ACTGTCGCCG
ACCACCGAAG TGCTGGTGGA AGAATCGGTG CTGGGCTGGA AGGAATTCGA GATGGAAGTG
GTGCGCGACA CCGCGGACAA CTGCATCATC GTGTGCGCCA TCGAAAACCT CGACCCGATG
GGCGTGCACA CCGGCGATTC GATCACCGTT GCGCCGGCGC AGACGCTCAC CGACAAGGAA
TACCAGCGCC TGCGCGATGC CTCGATTGCG GTGCTGCGCA AGATCGGCGT GGATACCGGC
GGCTCGAACG TGCAGTTCGG CATCAGCCCG ACCACCGGCC GCGTGGTCGT CATCGAAATG
AACCCGCGCG TGTCGCGTTC CTCGGCGCTG GCCTCCAAGG CCACCGGCTT CCCGATCGCC
AAGGTCGCCG CCAAGCTGGC CGTGGGCTAT ACGCTGGACG AATTGCGCAA CGAGATCACC
GGTGGTCTGA CCCCGGCCTC GTTCGAGCCG TCGATCGATT ATGTGGTCAC CAAGATTCCG
CGCTTTGCGT TCGAAAAGTT TCCCCAAGCC GATGCGCGCC TGACCACGCA GATGAAGTCG
GTGGGCGAGG TGATGGCGAT GGGCCGCACC TTCCAGGAAT CGCTGCAGAA AGCGCTGCGT
GGCCTGGAAA CCGGCAAGAT CGGCCTGGAT CCGACCGGTC TGGATCTGAG CAGCGAAGAC
GACATCGCCG CGCTCAAGCG CGAGCTCAAG GCGCCGGGCC CGGAGCGTCT GTTCTATGTC
GCCGACGCCT TCCGCGCCGG CATGACGGTG GCCGAGGTGT ACGCGCTGTC GTTCATCGAC
CCCTGGTTCC TGGACCAGAT CGAAGAGCTC ATCAGCCACG AACAGCAGCT GGCCGACGAC
GGCATGGCGG CGCTGGATGC CGCACGTCTG CGCATGCTCA AGTGTGCGGG TTTCTCCGAC
GCACGTCTGG CCGAGCTGAT CGGCAGCAAC GAAGAATCGG TGCGCACGTT GCGCCGCGCG
CTGGAAGTGC GCCCGGTCTA CAAGCGCGTG GACTCGTGCG CTGCCGAATT CGCCACCAGC
ACCGCCTACA TGTATTCGAC CTACGAGGAC GAATGCGAAG CGCTGCCGAC CGATCGCGAC
AAGATCATGA TTCTTGGCGG CGGCCCCAAC CGCATCGGCC AGGGTATCGA GTTCGATTAT
TGCTGCGTGC ACGCAGCACT GGCGCTGCGC GATGATGGCT TTGAAACCAT CATGGTCAAC
TGCAACCCGG AAACTGTCTC CACCGATTAC GACACGTCCG ACCGGCTGTA TTTCGAGCCG
CTGACGCTGG AAGACGTGCT GGAAATCGTC GAGCTGGAAA AACCCAAGGG GGTGATCGTG
CAGTACGGCG GCCAGACTCC GCTCAAGCTG GCGCGTGCGC TGGAAGCCAA CGGTGTGCCG
GTGATCGGCA CCTCACCGGA TTCGATCGAT CTGGCCGAAG ACCGCGAGCG TTTCCAGCAG
CTGGTCGACA CGCTTGGCCT GAAGCAGCCG CCGAACCGCA TCGCCCGCAA TGCCGAAGAA
GCCCTTGTGC TGGCGCGCGA AATCGGCTAC CCGCTGGTGG TGCGCCCGAG CTACGTGCTG
GGCGGCCGCG CGATGGAAAT CGTGTACGGC GAATCGGACC TGGCGCGCTA TGTGCGCGAT
GCGGTGAAGG TGTCCAACGA TTCGCCGGTG CTGCTGGACC GCTTCCTCGA TAACGCGGTG
GAAGTGGACG TGGACATCAT TGCCGACAAG GACGGCAACG TGCTGATCGG CGGGGTGATG
GAACACATCG AAGAAGCCGG CGTGCATTCG GGCGATTCGT CGTGCTCGCT GCCGCCGTAT
TCGCTTTCGC CGCAGACTCA GGCCGAGCTG CGTCGCCAGG TGGTGATGCT GGCCGAAGGG
TTGAACGTGG TCGGCCTGAT GAACACTCAG TTCGCAGTGC AGGTCAACGA GGCCGGCGAC
GACATCGTGT ATCTGCTGGA AGTGAACCCG CGTGCCTCGC GCACGGTGCC GTTCGTGTCC
AAGGCGATCG GCATGCCGCT TGCCAAGATT GCCGCACGCT GCATGGCCGG CAAGACACTG
GCCGAGCAGG GCGCCATCAA GGAGATCGTG CCGGACTATT ACTCGGTGAA GGAAGCGATT
TTCCCGTTCG CCAAGTTCCA GGGCGTGGAC CCGATCCTTG GGCCGGAGAT GCGCTCCACC
GGTGAGGTGA TGGGCGTGGG CCGCAGCTTC AGCGCCGCGT TCGCGCGCGC ACAGGAAGCC
GGTGGCATCA AGGCGCCGCC GGTGGGCAAG GCGTTCGTGT CGGTGCGCGA TCCGGACAAG
CAGCGCGTGC TGCCGGTGGC GCAGGCGCTG GTGGAACGGG GCTTTACGCT GGTGGCCACG
CGCGGCACCG GTGCCTGGCT GCAGCAGAAC GGGCTGAGTT GCGAGATCGT CAACAAGGTG
GCCGAAGGCC GCCCGCACAT CGTCGATTCG ATCAAGAACG GCGAGATCGT CTACATCGTC
AATACCACCG AAGGTCGCGC CGCCATCTCG GACTCGTTCT CGATCCGCCG CGAAGCGCTG
CAGCACCGCG TGACCTATTC GACTACTGTC GCCGGCGCCA AGGCGCTGGT GCATTCACTG
GAATTCCGCG GCACCGGCCC CGTGTGGTCG CTGCAGGAAC TGCACAAGGA GCTGGAAGCA
TGA
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| Protein sequence | MPKRTDLKTI LIIGAGPIVI GQACEFDYSG AQACKALRDE GYRVVLVNSN PATIMTDPNM
ADAVYIEPIN WQTVEKIISK EKPDALLPTM GGQTALNCAL DLADHGVLEK YNVELIGAKR
EAIRMAEDRE LFRVAMGEIG LDCPKAAVAH TLEEALEIQT RVGYPTIIRP SFTLGGSGGG
IAYNREELIE IVGRGLELSP TTEVLVEESV LGWKEFEMEV VRDTADNCII VCAIENLDPM
GVHTGDSITV APAQTLTDKE YQRLRDASIA VLRKIGVDTG GSNVQFGISP TTGRVVVIEM
NPRVSRSSAL ASKATGFPIA KVAAKLAVGY TLDELRNEIT GGLTPASFEP SIDYVVTKIP
RFAFEKFPQA DARLTTQMKS VGEVMAMGRT FQESLQKALR GLETGKIGLD PTGLDLSSED
DIAALKRELK APGPERLFYV ADAFRAGMTV AEVYALSFID PWFLDQIEEL ISHEQQLADD
GMAALDAARL RMLKCAGFSD ARLAELIGSN EESVRTLRRA LEVRPVYKRV DSCAAEFATS
TAYMYSTYED ECEALPTDRD KIMILGGGPN RIGQGIEFDY CCVHAALALR DDGFETIMVN
CNPETVSTDY DTSDRLYFEP LTLEDVLEIV ELEKPKGVIV QYGGQTPLKL ARALEANGVP
VIGTSPDSID LAEDRERFQQ LVDTLGLKQP PNRIARNAEE ALVLAREIGY PLVVRPSYVL
GGRAMEIVYG ESDLARYVRD AVKVSNDSPV LLDRFLDNAV EVDVDIIADK DGNVLIGGVM
EHIEEAGVHS GDSSCSLPPY SLSPQTQAEL RRQVVMLAEG LNVVGLMNTQ FAVQVNEAGD
DIVYLLEVNP RASRTVPFVS KAIGMPLAKI AARCMAGKTL AEQGAIKEIV PDYYSVKEAI
FPFAKFQGVD PILGPEMRST GEVMGVGRSF SAAFARAQEA GGIKAPPVGK AFVSVRDPDK
QRVLPVAQAL VERGFTLVAT RGTGAWLQQN GLSCEIVNKV AEGRPHIVDS IKNGEIVYIV
NTTEGRAAIS DSFSIRREAL QHRVTYSTTV AGAKALVHSL EFRGTGPVWS LQELHKELEA
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