| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00084 |
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| Symbol | rpfE |
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| ID | 6305271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1776273 |
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| End bp | 1777193 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642639042 |
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| Product | RpfE regulatory protein |
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| Protein accession | YP_001912915 |
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| Protein GI | 188575986 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4255] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.620416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACTG CCACGCTGCT GCTGCCGGAG AAACGCCGTC TGCCCGGAAC CCTGGGCAAC
ACGGCGGTGG CGCGTGCGCT TGCGCGCGCC GACGGGCACA GCGCCGATGC CGGCGAAGTG
GCGCAATTGC AGCGCCATTT CAACCTGATC CCGGCGCATT GGCCGGTGGC GGCATTGACG
CGCCAGCTGG ATGCCGGCGA TGCCGCTGGC GCCACTTGGG TGCGTGCCGA TCCGGCCCAT
GTGGTGCCGG ACATGCAGGG CGCGCGGTTG ATGGGCTACG GCGAGGCGCT TGGCCCCACC
GCCGAGGATC TGGCGGTGTT GCTGCCGATC CTCAAGCCGA TGTTCGGCGA TGCAGGATTT
CTGCTGGATG CGCCCACGCC ATCGCGCTGG TATCTGCGCT TGTCGCCGGA TGCGAAACTG
CCGGACTTTG CGCCGCCGGA TGTCGCGATC GGCGACGACT TGTTCGAGCA TTTGCCGGCT
GGCGAGAGCG GTCGCCGCTG GCGTGCACTA CTGACCGAAG CGCAGGTGCT GTTGCATCAG
CATCCGTGGA ACGAAGGCCG CGTGGCCAGC GGCAAGCCGG CAATCAATTC CCTGTGGTTC
TGGGGCGGCG GTGTGTTGCC GCATGCGGTG ACTTCGCCGC ATCGCCAGGT GCGCAGCCGC
GAATCGCTGC TGCGTGCGTT GGCGTTGGCC GCAGGTGCCG ATGCGCAGGG CGAACAACGC
GTCGATGCGT TGGTGGACCT GCGCCATCTG CGTTCCCTGC AGCAGTTCAG CGACGATGCG
GTGGCACCGC TGTTGGCGGC GATGGCGCGC GGCGAACTGG ATCGGCTGGT GCTGGATTTC
CAGGACGGCG AAAGCGTGTC GCTCACGCAT GCGCAGCGCT GGCGTTTCTG GCGCAAGCCG
CGGATACAGC TGGCGCAATG A
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| Protein sequence | MTTATLLLPE KRRLPGTLGN TAVARALARA DGHSADAGEV AQLQRHFNLI PAHWPVAALT
RQLDAGDAAG ATWVRADPAH VVPDMQGARL MGYGEALGPT AEDLAVLLPI LKPMFGDAGF
LLDAPTPSRW YLRLSPDAKL PDFAPPDVAI GDDLFEHLPA GESGRRWRAL LTEAQVLLHQ
HPWNEGRVAS GKPAINSLWF WGGGVLPHAV TSPHRQVRSR ESLLRALALA AGADAQGEQR
VDALVDLRHL RSLQQFSDDA VAPLLAAMAR GELDRLVLDF QDGESVSLTH AQRWRFWRKP
RIQLAQ
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