Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00079 |
Symbol | |
ID | 6305276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 1782124 |
End bp | 1782825 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642639047 |
Product | transposase subfamily, putative |
Protein accession | YP_001912920 |
Protein GI | 188575991 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3464] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.251545 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTGCTCCA ACTGCGGTCA TCGGTGTCGC AGCCGCTACG ACAAGCGCCT GTGTCGCGCC CGTGACCTGC GCGTGGCCGG CTGGACGCTG CACGTGGAGT TCGAGCGCTG GCGGGTCGAT TGCCCGGGGT GCGGCGGCGT GCACGTAGAG CGACTGGACT GGCTGGCGAA GAACCCGCGC TACACCGAGC GGTTCGCGCT GCATGTGGGC AATCTGTGCC GGAGCATGAC CCACACAGCC GTGGCCGAGC TGGAGCGGCT GCACGACAGT ACGGTCAAGG ACTTGTCCAA ACTGTACATG GCCGAACAGC TGCGTCGGGC GGGGACGCCG GCGCCGCGTA CCATCGGCAT CGACGAGATC GCGATCCACA AGGGCCATGA CTCTCGCGTG GTCGTCAGCG ACCTGGAACG CGGCCGACCG ATCTGCGCGG TCGTGGGGAG ACCATCGCCA ACACTGCGCG TCTATGGCTT CCAGCAATCT GACGCGGCCG ACGCGATCCG GGCGCTACTG GCCGCCGCCA ACGTGGAAGT GAACCGACCC GCCGTGGAGG CCGGTTTGCT GGTGCTCGAC GCAGGCGGTG ACTTTGCCGA TGGCGTCATT GCCTACGAAG GTAATTGGCT TGGTGGGGAA ACCTTCGTTT CCTTCGATAA GAAGGCGATG ACACTTCTCG CTGTCCAAGG GCAATCAGCG CGTCTTTTGT GA
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Protein sequence | MCSNCGHRCR SRYDKRLCRA RDLRVAGWTL HVEFERWRVD CPGCGGVHVE RLDWLAKNPR YTERFALHVG NLCRSMTHTA VAELERLHDS TVKDLSKLYM AEQLRRAGTP APRTIGIDEI AIHKGHDSRV VVSDLERGRP ICAVVGRPSP TLRVYGFQQS DAADAIRALL AAANVEVNRP AVEAGLLVLD AGGDFADGVI AYEGNWLGGE TFVSFDKKAM TLLAVQGQSA RLL
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