Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00049 |
Symbol | pilZ |
ID | 6305301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 1815391 |
End bp | 1816188 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642639072 |
Product | type IV pilus assembly protein PilZ |
Protein accession | YP_001912945 |
Protein GI | 188576016 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5581] Predicted glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTTGTGC CCATGTCCCA AGGCGATACC TCAAAGCTGG ACCACAACGC CGATCACCTC GCCGAAGGTG ACGAACGCTA TCTGCTGCGC AACAAGCGGC AGATCCGTGG ATTGCTGCGC CAACTGCTCG ACCAACGCGC CATCGTGACC ATGCATGTGG CCGGCCGCGA CTTGGCCGTG CCCACCGCCG TACTGGAAGT GGACGAAGAC GACGACTGCG TGATTCTGGA CGGCAGCCAT AACGATGCCT CCAACCGCGC CATCGAAGGC GCCAAATACC TGCTGTGCTA CACCCAACTG GAACGGGTCA ACATCCGCTT CCGGCTGGAA AAAGCCGAGC GTATCGAGCG CAACATCCAC GCCGCCTTCC GCGCCGACCT GCCCGATGCC GTCTATCACA TGCAGCGGCG CGAATCATAC CGGCTGGAAA CGCCGATCAC CGACTCGCCC ATCTGCACCA TTCGCCAGGA AGCCGAACAA GGCGAAGCGC TGAATCTACA GCTGCGCGTC ATCGACATCA GCAGCGGCGG CCTGGCGGTC TTGCTCACCG ATGGCATGCC CTTGCTTGAG CCGCAACGCA CCTACCGCAA CTGCATTCTG CAACTGCCCG ACACCACTCC CATTACGCTG CAGCTCACCG TGTGCAGCCA TTACAAGCAG ACCCTACCCA ACGGCAGCGA AGGCTTTCGC GTCGGCATGC ATTTCAGCGA CCTGCCGCGC GGCGCCGACG AAACCATCCA GCGCTACATT TTCCGCGTCG ACCGCCAGCG CAACGCGCGC AAGAGCGGCA TGTTCTGA
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Protein sequence | MLVPMSQGDT SKLDHNADHL AEGDERYLLR NKRQIRGLLR QLLDQRAIVT MHVAGRDLAV PTAVLEVDED DDCVILDGSH NDASNRAIEG AKYLLCYTQL ERVNIRFRLE KAERIERNIH AAFRADLPDA VYHMQRRESY RLETPITDSP ICTIRQEAEQ GEALNLQLRV IDISSGGLAV LLTDGMPLLE PQRTYRNCIL QLPDTTPITL QLTVCSHYKQ TLPNGSEGFR VGMHFSDLPR GADETIQRYI FRVDRQRNAR KSGMF
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