| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00048 |
|---|
| Symbol | |
|---|
| ID | 6305302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 1816819 |
|---|
| End bp | 1817295 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642639073 |
|---|
| Product | ISXo3 transposase ORF B |
|---|
| Protein accession | YP_001912946 |
|---|
| Protein GI | 188576017 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3293] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATCGTGG ACGCGCAGAG CGTGAAGAAC AGTGATACAG CCGGCCAGAA AGGCTATGAC
GCGGGCAAGA AGGTATCGGG GATCAAGCGC CACATCGCGG TGGATACGCA AGGCTTTCCA
CATGCCGTTG CGGTGACCAC GGCGGAAGTC ACCGATCGTC AAGGTGCGCT GGAGGCATTG
AAACGCTGCC GATCGGGTTT AGGTCGGGTG AAACGCCTGC TGTGCGACAG CGGCTGCACC
GGAGATCCCT TCGCCGAGGG CGTACAGGAC ATTCTGGGCA AGCATGTCAC CGTACAGATT
GCCAAGCGCA GCGAGCTGCA TACCTTCAAG GTCATGCCCA AGCGCTGGAT TGTCGAACGC
AGCTTTGCCT GGCTGGAGAA GAACCGGAGG CTATGGAAGA ACTGCGAGCG AAGGCTCAAT
ACCAGCTTGC AGTTCATCCA CCTGGCGTTC CTGGCACTGC TGCTCAGGAG ATCGTGA
|
|---|
| Protein sequence | MIVDAQSVKN SDTAGQKGYD AGKKVSGIKR HIAVDTQGFP HAVAVTTAEV TDRQGALEAL
KRCRSGLGRV KRLLCDSGCT GDPFAEGVQD ILGKHVTVQI AKRSELHTFK VMPKRWIVER
SFAWLEKNRR LWKNCERRLN TSLQFIHLAF LALLLRRS
|
|---|
| |